Equivalence class NR_4.0_32217.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3F73|1|H (rep) | RNA (5'-R(*UP*AP*UP*AP*CP*AP*A*CP*UP*CP*AP*CP*UP*AP*CP*CP*UP*CP*GP*U)-3') | Alignment of guide-target seed duplex within an argonaute silencing complex | X-ray diffraction | 3 | 2008-12-16 | ||||
| 2 | 3F73|1|Y | RNA (5'-R(*UP*AP*UP*AP*CP*AP*A*CP*UP*CP*AP*CP*UP*AP*CP*CP*UP*CP*GP*U)-3') | Alignment of guide-target seed duplex within an argonaute silencing complex | X-ray diffraction | 3 | 2008-12-16 | ||||
| 3 | 3HXM|1|Y | RNA (5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*UP*CP*AP*CP*UP*AP*CP*CP*UP*CP*GP*U)-3') | Structure of an argonaute complexed with guide DNA and target RNA duplex containing two mismatches. | X-ray diffraction | 3.1 | 2009-10-06 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3F73|1|H | Title: Alignment of guide-target seed duplex within an argonaute silencing complex | X-RAY DIFFRACTION | 3 | 20 | ||
| 2 | 3F73|1|Y | Title: Alignment of guide-target seed duplex within an argonaute silencing complex | X-RAY DIFFRACTION | 3 | 20 | ||
| 3 | 3HXM|1|Y | Title: Structure of an argonaute complexed with guide DNA and target RNA duplex containing two mismatches. | X-RAY DIFFRACTION | 3.1 | 20 |
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