Equivalence class NR_4.0_31518.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 259D|1|A+ 259D|1|B (rep) | RNA (5'-R(*CP*CP*CP*CP*GP*GP*GP*G)-3') | RNA HYDRATION: A DETAILED LOOK | X-ray diffraction | 1.46 | 1996-08-26 | ||||
| 2 | 1RXA|1|A | RNA (5'-R(*CP*CP*CP*CP*GP*GP*GP*G)-3') | CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES | X-ray diffraction | 2.9 | 1996-10-20 | ||||
| 3 | 1RXB|1|A+ 1RXB|1|B | RNA (5'-R(*CP*CP*CP*CP*GP*GP*GP*G)-3') | CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES | X-ray diffraction | 1.8 | 1996-08-26 | ||||
| 4 | 2A0P|1|A+ 2A0P|1|B | 5'-R(*CP*CP*(S4C)P*CP*GP*GP*GP*G)-3' | Crystal structure of RNA oligomer containing 4'-thioribose | X-ray diffraction | 1.95 | 2005-08-16 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_31518.1 | NR_all_88664.1 | 3.0 | (1) 1RXA|1|A | (3) 1RXB|1|A+1RXB|1|B, 259D|1|A+259D|1|B, 2A0P|1|A+2A0P|1|B | (3) 1RXB|1|A, 259D|1|A, 2A0P|1|A |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_31518.1 | NR_4.0_20799.1 | 6.0 | (1) 259D|1|A+259D|1|B | (3) 1RXA|1|A, 1RXB|1|A+1RXB|1|B, 2A0P|1|A+2A0P|1|B | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2A0P|1|A+2A0P|1|B | Title: Crystal structure of RNA oligomer containing 4'-thioribose | X-RAY DIFFRACTION | 1.95 | 7 | ||
| 2 | 259D|1|A+259D|1|B | Title: RNA HYDRATION: A DETAILED LOOK | X-RAY DIFFRACTION | 1.46 | 8 | ||
| 3 | 1RXB|1|A+1RXB|1|B | Title: CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES | X-RAY DIFFRACTION | 1.8 | 8 | ||
| 4 | 1RXA|1|A | Title: CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES | X-RAY DIFFRACTION | 2.9 | 8 |
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