Equivalence class NR_4.0_25705.2 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6I0T|1|B (rep) | RNA (5'-R(*GP*U)-3') | Drosophila melanogaster | Eukarya | Crystal structure of DmTailor in complex with GpU | X-ray diffraction | 2 | 2018-12-05 | ||
| 2 | 5K77|1|z | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | Saccharomyces cerevisiae | Eukarya | Dbr1 in complex with 7-mer branched RNA | X-ray diffraction | 2.17 | 2016-12-07 | ||
| 3 | 5K77|1|x | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | Saccharomyces cerevisiae | Eukarya | Dbr1 in complex with 7-mer branched RNA | X-ray diffraction | 2.17 | 2016-12-07 | ||
| 4 | 5K77|1|y | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | Saccharomyces cerevisiae | Eukarya | Dbr1 in complex with 7-mer branched RNA | X-ray diffraction | 2.17 | 2016-12-07 | ||
| 5 | 5K77|1|v | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | Saccharomyces cerevisiae | Eukarya | Dbr1 in complex with 7-mer branched RNA | X-ray diffraction | 2.17 | 2016-12-07 | ||
| 6 | 5K77|1|w | brnch 2 of branched RNA 5'-UAA(-2'GU)CA-3' | Saccharomyces cerevisiae | Eukarya | Dbr1 in complex with 7-mer branched RNA | X-ray diffraction | 2.17 | 2016-12-07 | ||
| 7 | 5F6C|1|C | RNA (5'-R(P*GP*U)-3') | Escherichia coli | Bacteria | The structure of E. coli RNase E catalytically inactive mutant with RNA bound | X-ray diffraction | 3 | 2016-12-14 | ||
| 8 | 1B2M|1|C | 5'-R(*GP*(U34))-3' | THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-ray diffraction | 2 | 1999-03-25 | ||||
| 9 | 1B2M|1|D | 5'-R(*GP*(U34))-3' | THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-ray diffraction | 2 | 1999-03-25 | ||||
| 10 | 1B2M|1|E | 5'-R(*GP*(U34))-3' | THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-ray diffraction | 2 | 1999-03-25 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5F6C|1|C | Title: The structure of E. coli RNase E catalytically inactive mutant with RNA bound | X-RAY DIFFRACTION | 3 | 2 | ||
| 2 | 1B2M|1|D | Title: THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-RAY DIFFRACTION | 2 | 1 | ||
| 3 | 1B2M|1|E | Title: THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-RAY DIFFRACTION | 2 | 1 | ||
| 4 | 1B2M|1|C | Title: THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS. | X-RAY DIFFRACTION | 2 | 1 | ||
| 5 | 5K77|1|y | Title: Dbr1 in complex with 7-mer branched RNA | X-RAY DIFFRACTION | 2.17 | 2 | ||
| 6 | 5K77|1|z | Title: Dbr1 in complex with 7-mer branched RNA | X-RAY DIFFRACTION | 2.17 | 2 | ||
| 7 | 5K77|1|v | Title: Dbr1 in complex with 7-mer branched RNA | X-RAY DIFFRACTION | 2.17 | 2 | ||
| 8 | 5K77|1|w | Title: Dbr1 in complex with 7-mer branched RNA | X-RAY DIFFRACTION | 2.17 | 2 | ||
| 9 | 5K77|1|x | Title: Dbr1 in complex with 7-mer branched RNA | X-RAY DIFFRACTION | 2.17 | 2 | ||
| 10 | 6I0T|1|B | Title: Crystal structure of DmTailor in complex with GpU | X-RAY DIFFRACTION | 2 | 2 |
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