Equivalence class NR_4.0_24706.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4B3T|1|Z+ 4B3T|1|W (rep) | 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP)-3', 5'-R(*UP*UP*CP*AP*AP*AP)-3' | Thermus thermophilus | Bacteria | Crystal structure of the 30S ribosome in complex with compound 39 | X-ray diffraction | 3 | 2013-08-07 | ||
| 2 | 4B3R|1|Z+ 4B3R|1|W | 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP-3', 5'-R(*UP*UP*CP*AP*AP*AP)-3' | Thermus thermophilus | Bacteria | Crystal structure of the 30S ribosome in complex with compound 30 | X-ray diffraction | 3 | 2013-08-07 | ||
| 3 | 4B3S|1|Z+ 4B3S|1|W | 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP)-3', 5'-R(*UP*UP*CP*AP*AP*AP)-3' | Thermus thermophilus | Bacteria | Crystal structure of the 30S ribosome in complex with compound 37 | X-ray diffraction | 3.15 | 2013-08-07 | ||
| 4 | 4B3M|1|Z+ 4B3M|1|W | 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP)-3', 5'-R(*UP*UP*CP*AP*AP*AP)-3' | Thermus thermophilus | Bacteria | Crystal structure of the 30S ribosome in complex with compound 1 | X-ray diffraction | 2.9 | 2013-08-07 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_24706.1 | NR_4.0_08303.1 | 6.0 | (1) 4B3T|1|Z+4B3T|1|W | (3) 4B3M|1|Z+4B3M|1|W, 4B3R|1|Z+4B3R|1|W, 4B3S|1|Z+4B3S|1|W | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4B3R|1|Z+4B3R|1|W | Title: Crystal structure of the 30S ribosome in complex with compound 30 | X-RAY DIFFRACTION | 3 | 15 | ||
| 2 | 4B3T|1|Z+4B3T|1|W | Title: Crystal structure of the 30S ribosome in complex with compound 39 | X-RAY DIFFRACTION | 3 | 15 | ||
| 3 | 4B3M|1|Z+4B3M|1|W | Title: Crystal structure of the 30S ribosome in complex with compound 1 | X-RAY DIFFRACTION | 2.9 | 16 | ||
| 4 | 4B3S|1|Z+4B3S|1|W | Title: Crystal structure of the 30S ribosome in complex with compound 37 | X-RAY DIFFRACTION | 3.15 | 15 |
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