Equivalence class NR_4.0_24141.1 Current
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1PVO|1|L (rep) | 5'-R(P*UP*C)-3' | X-ray crystal structure of Rho transcription termination factor in complex with ssRNA substrate and ANPPNP | X-ray diffraction | 3 | 2003-07-22 | ||||
2 | 1PVO|1|G | 5'-R(P*UP*C)-3' | X-ray crystal structure of Rho transcription termination factor in complex with ssRNA substrate and ANPPNP | X-ray diffraction | 3 | 2003-07-22 | ||||
3 | 1PVO|1|H | 5'-R(P*UP*C)-3' | X-ray crystal structure of Rho transcription termination factor in complex with ssRNA substrate and ANPPNP | X-ray diffraction | 3 | 2003-07-22 | ||||
4 | 1PVO|1|J | 5'-R(P*UP*C)-3' | X-ray crystal structure of Rho transcription termination factor in complex with ssRNA substrate and ANPPNP | X-ray diffraction | 3 | 2003-07-22 | ||||
5 | 1PVO|1|K | 5'-R(P*UP*C)-3' | X-ray crystal structure of Rho transcription termination factor in complex with ssRNA substrate and ANPPNP | X-ray diffraction | 3 | 2003-07-22 | ||||
6 | 2HT1|1|K | 5'-R(*UP*C)-3' | The closed ring structure of the Rho transcription termination factor in complex with nucleic acid in the motor domains | X-ray diffraction | 3.51 | 2006-11-14 | ||||
7 | 2HT1|1|J | 5'-R(*UP*C)-3' | The closed ring structure of the Rho transcription termination factor in complex with nucleic acid in the motor domains | X-ray diffraction | 3.51 | 2006-11-14 |
Release history
Release | 3.0 | 4.0 | 5.0 | 6.0 | 8.0 | 7.0 | 9.0 | 9.1 | 9.2 | 9.3 | 9.4 | 9.5 | 9.6 | 9.7 | 9.8 | 9.9 | 9.10 | 9.11 | 9.12 | 9.13 | 9.14 | 9.15 | 9.16 | 9.17 | 9.18 | 9.19 | 9.20 | 9.21 | 9.22 | 9.23 | 9.24 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2016-07-25 | 2016-07-25 | 2016-07-25 | 2017-04-04 | 2017-04-05 | 2017-04-05 | 2017-10-26 | 2017-11-07 | 2017-12-02 | 2017-12-13 | 2017-12-21 | 2017-12-22 | 2018-01-04 | 2018-01-05 | 2018-01-10 | 2018-01-11 | 2018-01-12 | 2018-01-28 | 2018-04-01 | 2018-04-01 | 2018-09-14 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-05 | 2018-12-12 | 2018-12-19 | 2018-12-26 | 2019-01-02 | 2019-01-09 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|---|---|---|---|---|
NR_4.0_24141.1 | NR_all_25964.1 | 3.0 | (1) 2HT1|1|J | (6) 1PVO|1|L, 1PVO|1|K, 1PVO|1|J, 1PVO|1|H, 1PVO|1|G, 2HT1|1|K | (0) |
NR_4.0_24141.1 | NR_all_40289.1 | 3.0 | (1) 1PVO|1|L | (6) 2HT1|1|K, 2HT1|1|J, 1PVO|1|K, 1PVO|1|J, 1PVO|1|H, 1PVO|1|G | (0) |
NR_4.0_24141.1 | NR_all_43872.1 | 3.0 | (1) 2HT1|1|K | (6) 2HT1|1|J, 1PVO|1|L, 1PVO|1|K, 1PVO|1|J, 1PVO|1|H, 1PVO|1|G | (0) |
NR_4.0_24141.1 | NR_all_62751.1 | 3.0 | (1) 1PVO|1|K | (6) 2HT1|1|K, 2HT1|1|J, 1PVO|1|L, 1PVO|1|J, 1PVO|1|H, 1PVO|1|G | (0) |
NR_4.0_24141.1 | NR_all_88835.1 | 3.0 | (1) 1PVO|1|J | (6) 2HT1|1|K, 2HT1|1|J, 1PVO|1|L, 1PVO|1|K, 1PVO|1|H, 1PVO|1|G | (0) |
NR_4.0_24141.1 | NR_all_95601.1 | 3.0 | (2) 1PVO|1|H, 1PVO|1|G | (5) 1PVO|1|K, 1PVO|1|J, 2HT1|1|K, 2HT1|1|J, 1PVO|1|L | (0) |
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 2HT1|1|J | Title: The closed ring structure of the Rho transcription termination factor in complex with nucleic acid in the motor domains | X-RAY DIFFRACTION | 3.51 | 2 | ||
2 | 1PVO|1|K | Title: X-ray crystal structure of Rho transcription termination factor in complex with ssRNA substrate and ANPPNP | X-RAY DIFFRACTION | 3 | 2 | ||
3 | 1PVO|1|G | Title: X-ray crystal structure of Rho transcription termination factor in complex with ssRNA substrate and ANPPNP | X-RAY DIFFRACTION | 3 | 2 | ||
4 | 1PVO|1|H | Title: X-ray crystal structure of Rho transcription termination factor in complex with ssRNA substrate and ANPPNP | X-RAY DIFFRACTION | 3 | 2 | ||
5 | 1PVO|1|L | Title: X-ray crystal structure of Rho transcription termination factor in complex with ssRNA substrate and ANPPNP | X-RAY DIFFRACTION | 3 | 2 | ||
6 | 1PVO|1|J | Title: X-ray crystal structure of Rho transcription termination factor in complex with ssRNA substrate and ANPPNP | X-RAY DIFFRACTION | 3 | 2 | ||
7 | 2HT1|1|K | Title: The closed ring structure of the Rho transcription termination factor in complex with nucleic acid in the motor domains | X-RAY DIFFRACTION | 3.51 | 2 |
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