Equivalence class NR_4.0_22208.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4YAZ|1|R (rep) | Cyclic di-GMP-I riboswitch | RNA (84-MER) | Geobacter | Bacteria | RF01051 | 3',3'-cGAMP riboswitch bound with 3',3'-cGAMP | X-ray diffraction | 2 | 2015-04-15 |
| 2 | 4YAZ|1|A | Cyclic di-GMP-I riboswitch | RNA (84-MER) | Geobacter | Bacteria | RF01051 | 3',3'-cGAMP riboswitch bound with 3',3'-cGAMP | X-ray diffraction | 2 | 2015-04-15 |
| 3 | 4YB0|1|A | Cyclic di-GMP-I riboswitch | RNA (84-MER) | Geobacter | Bacteria | RF01051 | 3',3'-cGAMP riboswitch bound with c-di-GMP | X-ray diffraction | 2.12 | 2015-04-15 |
| 4 | 4YB0|1|R | Cyclic di-GMP-I riboswitch | RNA (84-MER) | Geobacter | Bacteria | RF01051 | 3',3'-cGAMP riboswitch bound with c-di-GMP | X-ray diffraction | 2.12 | 2015-04-15 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4YAZ|1|A | Title: 3',3'-cGAMP riboswitch bound with 3',3'-cGAMP | X-RAY DIFFRACTION | 2 | 83 | ||
| 2 | 4YAZ|1|R | Title: 3',3'-cGAMP riboswitch bound with 3',3'-cGAMP | X-RAY DIFFRACTION | 2 | 83 | ||
| 3 | 4YB0|1|R | Title: 3',3'-cGAMP riboswitch bound with c-di-GMP | X-RAY DIFFRACTION | 2.12 | 83 | ||
| 4 | 4YB0|1|A | Title: 3',3'-cGAMP riboswitch bound with c-di-GMP | X-RAY DIFFRACTION | 2.12 | 83 |
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