Equivalence class NR_4.0_21868.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6BM2|1|R (rep) | RNA (5'-R(*AP*UP*CP*AP*AP*GP*AP*GP*A)-3') | synthetic construct | Synthetic | Pol II elongation complex with an abasic lesion at i-1 position | X-ray diffraction | 3.4 | 2018-02-28 | ||
| 2 | 6BM4|1|R | RNA (5'-R(*AP*UP*CP*AP*AP*GP*AP*GP*A)-3') | synthetic construct | Synthetic | Pol II elongation complex with an abasic lesion at i-1 position,soaking UMPNPP | X-ray diffraction | 2.95 | 2018-02-28 | ||
| 3 | 6BQF|1|R | RNA (5'-R(*AP*UP*CP*AP*AP*GP*AP*GP*A)-3') | synthetic construct | Synthetic | Pol II elongation complex with 'dT-AP' at i+1, i-1 position | X-ray diffraction | 3.35 | 2018-02-28 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 6BM4|1|R | Title: Pol II elongation complex with an abasic lesion at i-1 position,soaking UMPNPP | X-RAY DIFFRACTION | 2.95 | 9 | ||
| 2 | 6BM2|1|R | Title: Pol II elongation complex with an abasic lesion at i-1 position | X-RAY DIFFRACTION | 3.4 | 9 | ||
| 3 | 6BQF|1|R | Title: Pol II elongation complex with 'dT-AP' at i+1, i-1 position | X-RAY DIFFRACTION | 3.35 | 9 |
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