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Equivalence class NR_4.0_20104.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
13OL9|1|J (rep)RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.252010-12-22
23OLB|1|JRNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.412010-12-22
33OL6|1|JRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.52010-12-22
43OL7|1|BRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with CTPX-ray diffraction2.72010-12-22
53OL9|1|BRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.252010-12-22
63OLB|1|BRNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.412010-12-22
73OL6|1|BRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.52010-12-22
83OLA|1|JRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-ray diffraction2.552010-12-22
93OLA|1|BRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-ray diffraction2.552010-12-22
103OL8|1|BRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with CTP-MnX-ray diffraction2.752010-12-22
113OLA|1|FRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-ray diffraction2.552010-12-22
123OL8|1|JRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with CTP-MnX-ray diffraction2.752010-12-22
133OL7|1|JRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*C)-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with CTPX-ray diffraction2.72010-12-22

Release history

Release2.0
Date2014-12-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
13OL9|1|BTitle: Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2518
23OLA|1|BTitle: Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-RAY DIFFRACTION2.5517
33OLA|1|FTitle: Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-RAY DIFFRACTION2.5517
43OLB|1|JTitle: Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4119
53OLB|1|BTitle: Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4118
63OL8|1|BTitle: Poliovirus polymerase elongation complex with CTP-MnX-RAY DIFFRACTION2.7517
73OL7|1|BTitle: Poliovirus polymerase elongation complex with CTPX-RAY DIFFRACTION2.718
83OL7|1|JTitle: Poliovirus polymerase elongation complex with CTPX-RAY DIFFRACTION2.716
93OL8|1|JTitle: Poliovirus polymerase elongation complex with CTP-MnX-RAY DIFFRACTION2.7517
103OL9|1|JTitle: Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2519
113OL6|1|JTitle: Poliovirus polymerase elongation complexX-RAY DIFFRACTION2.519
123OLA|1|JTitle: Poliovirus polymerase elongation complex with 2'-deoxy-CTPX-RAY DIFFRACTION2.5518
133OL6|1|BTitle: Poliovirus polymerase elongation complexX-RAY DIFFRACTION2.518

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