Equivalence class NR_4.0_19043.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 364D|1|C+ 364D|1|B+ 364D|1|A (rep) | RNA (5'-R(*UP*GP*)-D(*(1SC)P*)-R(*CP*UP*GP*GP*CP*GP*GP*C)-3'), RNA (5'-R(*CP*CP*GP*AP*UP*GP*GP*UP*AP*GP*UP*GP*UP*GP*GP*GP*G *UP*C)-3'), RNA (5'-R(*CP*CP*CP*CP*AP*UP*GP*CP*GP*AP*GP*AP*GP*UP*AP*GP*G P*GP*AP*AP*CP*UP*GP*CP*CP*AP*GP*GP*CP*AP*U)-3') | Escherichia coli | Bacteria | 3.0 A STRUCTURE OF FRAGMENT I FROM E. COLI 5S RRNA | X-ray diffraction | 3 | 1998-01-02 | ||
| 2 | 357D|1|C+ 357D|1|B+ 357D|1|A | RNA-DNA (5'-R(*UP*GP*DCP)-D(*CP(S)*)-R(*UP*GP*GP*CP*GP*GP*C)-3'), RNA (5'-R(*CP*CP*GP*AP*UP*GP*GP*UP*AP*GP*UP*GP*UP*GP*GP*GP*G*UP*C)-3'), RNA (5'-R(*CP*CP*CP*CP*AP*UP*GP*CP*GP*AP*GP*AP*GP*UP*AP*GP*G P*GP*AP*AP*CP*UP* GP*CP*CP*AP*GP*GP*CP*AP*U)-3') | Escherichia coli | Bacteria | 3.5 A structure of fragment I from E. coli 5S RRNA | X-ray diffraction | 3.5 | 1997-12-01 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_19043.1 | NR_4.0_22950.1 | 6.0 | (1) 364D|1|C+364D|1|B+364D|1|A | (1) 357D|1|C+357D|1|B+357D|1|A | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 364D|1|C+364D|1|B+364D|1|A | Title: 3.0 A STRUCTURE OF FRAGMENT I FROM E. COLI 5S RRNA | X-RAY DIFFRACTION | 3 | 31 | ||
| 2 | 357D|1|C+357D|1|B+357D|1|A | Title: 3.5 A structure of fragment I from E. coli 5S RRNA | X-RAY DIFFRACTION | 3.5 | 31 |
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