Equivalence class NR_4.0_18580.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1SA9|1|E (rep) | 5'-R(*GP*GP*CP*GP*AP*GP*CP*C)-3' | Crystal Structure of the RNA octamer GGCGAGCC | X-ray diffraction | 2.86 | 2004-05-18 | ||||
| 2 | 1SA9|1|A+ 1SA9|1|B | 5'-R(*GP*GP*CP*GP*AP*GP*CP*C)-3' | Crystal Structure of the RNA octamer GGCGAGCC | X-ray diffraction | 2.86 | 2004-05-18 | ||||
| 3 | 1SA9|1|C+ 1SA9|1|D | 5'-R(*GP*GP*CP*GP*AP*GP*CP*C)-3' | Crystal Structure of the RNA octamer GGCGAGCC | X-ray diffraction | 2.86 | 2004-05-18 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_18580.1 | NR_all_15398.1 | 3.0 | (1) 1SA9|1|E | (2) 1SA9|1|A+1SA9|1|B, 1SA9|1|C+1SA9|1|D | (3) 1SA9|1|A, 1SA9|1|C, 1YFV|1|A |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_18580.1 | NR_4.0_18580.2 | 6.0 | (3) 1SA9|1|A+1SA9|1|B, 1SA9|1|C+1SA9|1|D, 1SA9|1|E | (0) | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1SA9|1|C+1SA9|1|D | Title: Crystal Structure of the RNA octamer GGCGAGCC | X-RAY DIFFRACTION | 2.86 | 8 | ||
| 2 | 1SA9|1|A+1SA9|1|B | Title: Crystal Structure of the RNA octamer GGCGAGCC | X-RAY DIFFRACTION | 2.86 | 8 | ||
| 3 | 1SA9|1|E | Title: Crystal Structure of the RNA octamer GGCGAGCC | X-RAY DIFFRACTION | 2.86 | 8 |
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