Equivalence class NR_4.0_18483.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5VJ9|1|C (rep) | RNA (5'-R(*GP*CP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*UP*GP*C)-3') | Pseudomonas aeruginosa | Bacteria | Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa | X-ray diffraction | 1.57 | 2017-06-28 | ||
| 2 | 5VJ9|1|D | RNA (5'-R(*GP*CP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*UP*GP*C)-3') | Pseudomonas aeruginosa | Bacteria | Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa | X-ray diffraction | 1.57 | 2017-06-28 | ||
| 3 | 5VJ9|1|B | RNA (5'-R(*GP*CP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*UP*GP*C)-3') | Pseudomonas aeruginosa | Bacteria | Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa | X-ray diffraction | 1.57 | 2017-06-28 | ||
| 4 | 5VJ9|1|A | RNA (5'-R(*GP*CP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*UP*GP*C)-3') | Pseudomonas aeruginosa | Bacteria | Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa | X-ray diffraction | 1.57 | 2017-06-28 | ||
| 5 | 5VJB|1|D | RNA (5'-R(*GP*CP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*(5BU)P*GP*C)-3') | Pseudomonas aeruginosa | Bacteria | Guanidine-II riboswitch P2 hairpin dimer with 5-bromoU substitution from Pseudomonas aeruginosa | X-ray diffraction | 2.1 | 2017-06-28 | ||
| 6 | 5VJB|1|A | RNA (5'-R(*GP*CP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*(5BU)P*GP*C)-3') | Pseudomonas aeruginosa | Bacteria | Guanidine-II riboswitch P2 hairpin dimer with 5-bromoU substitution from Pseudomonas aeruginosa | X-ray diffraction | 2.1 | 2017-06-28 | ||
| 7 | 5VJB|1|C | RNA (5'-R(*GP*CP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*(5BU)P*GP*C)-3') | Pseudomonas aeruginosa | Bacteria | Guanidine-II riboswitch P2 hairpin dimer with 5-bromoU substitution from Pseudomonas aeruginosa | X-ray diffraction | 2.1 | 2017-06-28 | ||
| 8 | 5VJB|1|B | RNA (5'-R(*GP*CP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*(5BU)P*GP*C)-3') | Pseudomonas aeruginosa | Bacteria | Guanidine-II riboswitch P2 hairpin dimer with 5-bromoU substitution from Pseudomonas aeruginosa | X-ray diffraction | 2.1 | 2017-06-28 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5VJ9|1|B | Title: Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa | X-RAY DIFFRACTION | 1.57 | 16 | ||
| 2 | 5VJB|1|B | Title: Guanidine-II riboswitch P2 hairpin dimer with 5-bromoU substitution from Pseudomonas aeruginosa | X-RAY DIFFRACTION | 2.1 | 15 | ||
| 3 | 5VJB|1|D | Title: Guanidine-II riboswitch P2 hairpin dimer with 5-bromoU substitution from Pseudomonas aeruginosa | X-RAY DIFFRACTION | 2.1 | 15 | ||
| 4 | 5VJ9|1|D | Title: Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa | X-RAY DIFFRACTION | 1.57 | 16 | ||
| 5 | 5VJ9|1|C | Title: Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa | X-RAY DIFFRACTION | 1.57 | 16 | ||
| 6 | 5VJB|1|C | Title: Guanidine-II riboswitch P2 hairpin dimer with 5-bromoU substitution from Pseudomonas aeruginosa | X-RAY DIFFRACTION | 2.1 | 15 | ||
| 7 | 5VJ9|1|A | Title: Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa | X-RAY DIFFRACTION | 1.57 | 16 | ||
| 8 | 5VJB|1|A | Title: Guanidine-II riboswitch P2 hairpin dimer with 5-bromoU substitution from Pseudomonas aeruginosa | X-RAY DIFFRACTION | 2.1 | 15 |
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