Equivalence class NR_4.0_18272.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5LZS|1|3 (rep) | Transfer RNA | E-site tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B | Electron microscopy | 3.31 | 2016-11-30 |
| 2 | 5LZV|1|3 | Transfer RNA | E-site tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1. | Electron microscopy | 3.35 | 2016-11-30 |
| 3 | 5LZZ|1|3 | Transfer RNA | E-site tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the mammalian rescue complex with Pelota and Hbs1l (combined) | Electron microscopy | 3.47 | 2016-11-30 |
| 4 | 5LZW|1|3 | Transfer RNA | E-site tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA. | Electron microscopy | 3.53 | 2016-11-30 |
| 5 | 5LZX|1|3 | Transfer RNA | E-site tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon. | Electron microscopy | 3.67 | 2016-11-30 |
| 6 | 5LZT|1|3 | Transfer RNA | E-site tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the mammalian ribosomal termination complex with eRF1 and eRF3. | Electron microscopy | 3.65 | 2016-11-30 |
| 7 | 5LZU|1|3 | Transfer RNA | E-site tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the mammalian ribosomal termination complex with accommodated eRF1 | Electron microscopy | 3.75 | 2016-11-30 |
| 8 | 5LZY|1|3 | Transfer RNA | tRNA | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA. | Electron microscopy | 3.99 | 2016-11-30 |
| 9 | 5LZY|1|2 | Transfer RNA | tRNA, mRNA (polyadenylated) | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA. | Electron microscopy | 3.99 | 2016-11-30 |
| 10 | 3JAI|1|3 | Transfer RNA | tRNA(Lys) | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon | Electron microscopy | 3.65 | 2015-08-12 |
| 11 | 3JAH|1|3 | Transfer RNA | tRNA(Lys) | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon | Electron microscopy | 3.45 | 2015-08-12 |
| 12 | 3JAG|1|3 | Transfer RNA | tRNA(Lys) | Oryctolagus cuniculus | Eukarya | RF00005 | Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon | Electron microscopy | 3.65 | 2015-08-12 |
Release history
| Release | 8.0 | 9.0 | 9.1 | 9.2 | 9.3 | 9.4 | 9.5 | 9.6 | 9.7 | 9.8 | 9.9 | 9.10 | 9.11 | 9.12 | 9.13 | 9.14 | 9.15 | 9.16 | 9.17 | 9.18 | 9.19 | 9.20 | 9.21 | 9.22 | 9.23 | 9.24 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2017-04-05 | 2017-10-26 | 2017-11-07 | 2017-12-02 | 2017-12-13 | 2017-12-21 | 2017-12-22 | 2018-01-04 | 2018-01-05 | 2018-01-10 | 2018-01-11 | 2018-01-12 | 2018-01-28 | 2018-04-01 | 2018-04-01 | 2018-09-14 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-05 | 2018-12-12 | 2018-12-19 | 2018-12-26 | 2019-01-02 | 2019-01-09 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3JAI|1|3 | Title: Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon | ELECTRON MICROSCOPY | 3.65 | 75 | ||
| 2 | 3JAH|1|3 | Title: Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon | ELECTRON MICROSCOPY | 3.45 | 75 | ||
| 3 | 3JAG|1|3 | Title: Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon | ELECTRON MICROSCOPY | 3.65 | 75 | ||
| 4 | 5LZV|1|3 | Title: Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1. | ELECTRON MICROSCOPY | 3.35 | 75 | ||
| 5 | 5LZU|1|3 | Title: Structure of the mammalian ribosomal termination complex with accommodated eRF1 | ELECTRON MICROSCOPY | 3.75 | 75 | ||
| 6 | 5LZT|1|3 | Title: Structure of the mammalian ribosomal termination complex with eRF1 and eRF3. | ELECTRON MICROSCOPY | 3.65 | 75 | ||
| 7 | 5LZW|1|3 | Title: Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA. | ELECTRON MICROSCOPY | 3.53 | 75 | ||
| 8 | 5LZX|1|3 | Title: Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon. | ELECTRON MICROSCOPY | 3.67 | 75 | ||
| 9 | 5LZS|1|3 | Title: Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B | ELECTRON MICROSCOPY | 3.31 | 75 | ||
| 10 | 5LZZ|1|3 | Title: Structure of the mammalian rescue complex with Pelota and Hbs1l (combined) | ELECTRON MICROSCOPY | 3.47 | 75 | ||
| 11 | 5LZY|1|3 | Title: Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA. | ELECTRON MICROSCOPY | 3.99 | 75 | ||
| 12 | 5LZY|1|2 | Title: Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA. | ELECTRON MICROSCOPY | 3.99 | 75 |
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