#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
13R2D|1|R+ 3R2D|1|S (rep)5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3'Aquifex aeolicusBacteriaCrystal Structure of Antitermination Factors NusB and NusE in complex with dsRNAX-ray diffraction2.22011-06-22
24EYA|1|a+ 4EYA|1|bRNA (5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3')synthetic constructSyntheticCrystal Structure of a Plectonemic RNA SupercoilX-ray diffraction3.22012-06-20
34EYA|1|c+ 4EYA|1|dRNA (5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3')synthetic constructSyntheticCrystal Structure of a Plectonemic RNA SupercoilX-ray diffraction3.22012-06-20
44EYA|1|e+ 4EYA|1|fRNA (5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3')synthetic constructSyntheticCrystal Structure of a Plectonemic RNA SupercoilX-ray diffraction3.22012-06-20
54EYA|1|g+ 4EYA|1|hRNA (5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3')synthetic constructSyntheticCrystal Structure of a Plectonemic RNA SupercoilX-ray diffraction3.22012-06-20
64EYA|1|i+ 4EYA|1|jRNA (5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3')synthetic constructSyntheticCrystal Structure of a Plectonemic RNA SupercoilX-ray diffraction3.22012-06-20
74EYA|1|k+ 4EYA|1|lRNA (5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3')synthetic constructSyntheticCrystal Structure of a Plectonemic RNA SupercoilX-ray diffraction3.22012-06-20
84EYA|1|m+ 4EYA|1|nRNA (5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3')synthetic constructSyntheticCrystal Structure of a Plectonemic RNA SupercoilX-ray diffraction3.22012-06-20
94EYA|1|o+ 4EYA|1|pRNA (5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3')synthetic constructSyntheticCrystal Structure of a Plectonemic RNA SupercoilX-ray diffraction3.22012-06-20
104EYA|1|q+ 4EYA|1|rRNA (5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3')synthetic constructSyntheticCrystal Structure of a Plectonemic RNA SupercoilX-ray diffraction3.22012-06-20
114EYA|1|s+ 4EYA|1|tRNA (5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3')synthetic constructSyntheticCrystal Structure of a Plectonemic RNA SupercoilX-ray diffraction3.22012-06-20
123R2C|1|S5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3'Aquifex aeolicusBacteriaCrystal Structure of Antitermination Factors NusB and NusE in complex with BoxA RNAX-ray diffraction1.92011-06-22
133R2C|1|R5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3'Aquifex aeolicusBacteriaCrystal Structure of Antitermination Factors NusB and NusE in complex with BoxA RNAX-ray diffraction1.92011-06-22

Release history

Release4.0
Date2016-07-25

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_17855.1NR_all_16637.14.0(2) 4EYA|1|s+4EYA|1|t, 4EYA|1|g+4EYA|1|h(11) 4EYA|1|k+4EYA|1|l, 4EYA|1|i+4EYA|1|j, 4EYA|1|e+4EYA|1|f, 4EYA|1|c+4EYA|1|d, 4EYA|1|a+4EYA|1|b, 3R2D|1|R+3R2D|1|S, 3R2C|1|S, 3R2C|1|R, 4EYA|1|q+4EYA|1|r, 4EYA|1|o+4EYA|1|p, 4EYA|1|m+4EYA|1|n(0)
NR_4.0_17855.1NR_all_65707.14.0(2) 4EYA|1|k+4EYA|1|l, 4EYA|1|i+4EYA|1|j(11) 4EYA|1|s+4EYA|1|t, 4EYA|1|q+4EYA|1|r, 4EYA|1|o+4EYA|1|p, 4EYA|1|m+4EYA|1|n, 4EYA|1|g+4EYA|1|h, 4EYA|1|e+4EYA|1|f, 4EYA|1|c+4EYA|1|d, 4EYA|1|a+4EYA|1|b, 3R2D|1|R+3R2D|1|S, 3R2C|1|S, 3R2C|1|R(0)
NR_4.0_17855.1NR_all_65764.14.0(2) 3R2C|1|R, 3R2C|1|S(11) 4EYA|1|k+4EYA|1|l, 4EYA|1|i+4EYA|1|j, 4EYA|1|g+4EYA|1|h, 4EYA|1|e+4EYA|1|f, 4EYA|1|c+4EYA|1|d, 4EYA|1|a+4EYA|1|b, 3R2D|1|R+3R2D|1|S, 4EYA|1|s+4EYA|1|t, 4EYA|1|q+4EYA|1|r, 4EYA|1|o+4EYA|1|p, 4EYA|1|m+4EYA|1|n(0)
NR_4.0_17855.1NR_all_73798.14.0(2) 4EYA|1|o+4EYA|1|p, 4EYA|1|c+4EYA|1|d(11) 4EYA|1|g+4EYA|1|h, 4EYA|1|e+4EYA|1|f, 4EYA|1|a+4EYA|1|b, 3R2D|1|R+3R2D|1|S, 3R2C|1|S, 3R2C|1|R, 4EYA|1|s+4EYA|1|t, 4EYA|1|q+4EYA|1|r, 4EYA|1|m+4EYA|1|n, 4EYA|1|k+4EYA|1|l, 4EYA|1|i+4EYA|1|j(0)
NR_4.0_17855.1NR_all_89765.14.0(2) 4EYA|1|m+4EYA|1|n, 4EYA|1|a+4EYA|1|b(11) 4EYA|1|s+4EYA|1|t, 4EYA|1|q+4EYA|1|r, 4EYA|1|o+4EYA|1|p, 4EYA|1|k+4EYA|1|l, 4EYA|1|i+4EYA|1|j, 4EYA|1|g+4EYA|1|h, 4EYA|1|e+4EYA|1|f, 4EYA|1|c+4EYA|1|d, 3R2D|1|R+3R2D|1|S, 3R2C|1|S, 3R2C|1|R(0)
NR_4.0_17855.1NR_all_90558.14.0(1) 3R2D|1|R+3R2D|1|S(12) 4EYA|1|e+4EYA|1|f, 4EYA|1|c+4EYA|1|d, 4EYA|1|a+4EYA|1|b, 3R2C|1|S, 3R2C|1|R, 4EYA|1|s+4EYA|1|t, 4EYA|1|q+4EYA|1|r, 4EYA|1|o+4EYA|1|p, 4EYA|1|m+4EYA|1|n, 4EYA|1|k+4EYA|1|l, 4EYA|1|i+4EYA|1|j, 4EYA|1|g+4EYA|1|h(0)
NR_4.0_17855.1NR_all_93051.14.0(2) 4EYA|1|q+4EYA|1|r, 4EYA|1|e+4EYA|1|f(11) 4EYA|1|s+4EYA|1|t, 4EYA|1|o+4EYA|1|p, 4EYA|1|m+4EYA|1|n, 4EYA|1|k+4EYA|1|l, 4EYA|1|i+4EYA|1|j, 4EYA|1|g+4EYA|1|h, 4EYA|1|c+4EYA|1|d, 4EYA|1|a+4EYA|1|b, 3R2D|1|R+3R2D|1|S, 3R2C|1|S, 3R2C|1|R(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
13R2D|1|R+3R2D|1|STitle: Crystal Structure of Antitermination Factors NusB and NusE in complex with dsRNAX-RAY DIFFRACTION2.212
24EYA|1|g+4EYA|1|hTitle: Crystal Structure of a Plectonemic RNA SupercoilX-RAY DIFFRACTION3.212
34EYA|1|m+4EYA|1|nTitle: Crystal Structure of a Plectonemic RNA SupercoilX-RAY DIFFRACTION3.212
44EYA|1|c+4EYA|1|dTitle: Crystal Structure of a Plectonemic RNA SupercoilX-RAY DIFFRACTION3.212
54EYA|1|a+4EYA|1|bTitle: Crystal Structure of a Plectonemic RNA SupercoilX-RAY DIFFRACTION3.212
64EYA|1|k+4EYA|1|lTitle: Crystal Structure of a Plectonemic RNA SupercoilX-RAY DIFFRACTION3.212
74EYA|1|i+4EYA|1|jTitle: Crystal Structure of a Plectonemic RNA SupercoilX-RAY DIFFRACTION3.212
84EYA|1|s+4EYA|1|tTitle: Crystal Structure of a Plectonemic RNA SupercoilX-RAY DIFFRACTION3.212
94EYA|1|o+4EYA|1|pTitle: Crystal Structure of a Plectonemic RNA SupercoilX-RAY DIFFRACTION3.212
104EYA|1|q+4EYA|1|rTitle: Crystal Structure of a Plectonemic RNA SupercoilX-RAY DIFFRACTION3.212
114EYA|1|e+4EYA|1|fTitle: Crystal Structure of a Plectonemic RNA SupercoilX-RAY DIFFRACTION3.212
123R2C|1|RTitle: Crystal Structure of Antitermination Factors NusB and NusE in complex with BoxA RNAX-RAY DIFFRACTION1.99
133R2C|1|STitle: Crystal Structure of Antitermination Factors NusB and NusE in complex with BoxA RNAX-RAY DIFFRACTION1.910

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