Equivalence class NR_4.0_12839.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2R22|1|A+ 2R22|1|B (rep) | RNA (5'-R(*GP*CP*GP*UP*UP*UP*GP*AP*AP*AP*CP*GP*C)-3') | Structure of the native RNA tridecamer r(GCGUUUGAAACGC) at 1.5 A (NatMn) | X-ray diffraction | 1.4 | 2007-09-25 | ||||
| 2 | 2R1S|1|A+ 2R1S|1|B | RNA (5'-R(*GP*CP*GP*UP*UP*(5BU)P*GP*AP*AP*AP*CP*GP*C)-3') | Structure of the RNA brominated tridecamer r(GCGUU-5BUGAAACGC) at 1.4 A (Br1) | X-ray diffraction | 1.4 | 2007-09-25 | ||||
| 3 | 2R21|1|A+ 2R21|1|B | RNA (5'-R(*GP*CP*GP*UP*UP*(5BU)P*GP*AP*AP*AP*CP*GP*C)-3') | Structure of the RNA brominated tridecamer r(GCGUU-5BUGAAACGC) at 1.6 A (BrMn) | X-ray diffraction | 1.59 | 2007-09-25 | ||||
| 4 | 2R20|1|A+ 2R20|1|B | RNA (5'-R(*GP*CP*GP*UP*UP*(5BU)P*GP*AP*AP*AP*CP*GP*C)-3') | Structure of the RNA brominated tridecamer r(GCGUU-5BUGAAACGC) at 1.3 A (Br2) | X-ray diffraction | 1.3 | 2007-09-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_12839.1 | NR_4.0_80546.1 | 6.0 | (1) 2R22|1|A+2R22|1|B | (3) 2R1S|1|A+2R1S|1|B, 2R20|1|A+2R20|1|B, 2R21|1|A+2R21|1|B | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2R20|1|A+2R20|1|B | Title: Structure of the RNA brominated tridecamer r(GCGUU-5BUGAAACGC) at 1.3 A (Br2) | X-RAY DIFFRACTION | 1.3 | 12 | ||
| 2 | 2R21|1|A+2R21|1|B | Title: Structure of the RNA brominated tridecamer r(GCGUU-5BUGAAACGC) at 1.6 A (BrMn) | X-RAY DIFFRACTION | 1.59 | 12 | ||
| 3 | 2R1S|1|A+2R1S|1|B | Title: Structure of the RNA brominated tridecamer r(GCGUU-5BUGAAACGC) at 1.4 A (Br1) | X-RAY DIFFRACTION | 1.4 | 12 | ||
| 4 | 2R22|1|A+2R22|1|B | Title: Structure of the native RNA tridecamer r(GCGUUUGAAACGC) at 1.5 A (NatMn) | X-RAY DIFFRACTION | 1.4 | 13 |
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