Equivalence class NR_4.0_12658.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4A3E|1|P (rep) | TRANSCRIPT RNA 5'-R(*CP*AP*GP*GP*AP)-3' | Saccharomyces cerevisiae | Eukarya | RNA Polymerase II initial transcribing complex with a 5nt DNA-RNA hybrid and soaked with AMPCPP | X-ray diffraction | 3.4 | 2011-12-07 | ||
| 2 | 4A3C|1|P | TRANSCRIPT RNA, 5'-R(*CP*AP*GP*GP*AP)-3' | Saccharomyces cerevisiae | Eukarya | RNA Polymerase II initial transcribing complex with a 5nt DNA-RNA hybrid | X-ray diffraction | 3.5 | 2011-11-16 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_12658.1 | NR_4.0_55282.1 | 6.0 | (1) 4A3E|1|P | (1) 4A3C|1|P | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4A3E|1|P | Title: RNA Polymerase II initial transcribing complex with a 5nt DNA-RNA hybrid and soaked with AMPCPP | X-RAY DIFFRACTION | 3.4 | 4 | ||
| 2 | 4A3C|1|P | Title: RNA Polymerase II initial transcribing complex with a 5nt DNA-RNA hybrid | X-RAY DIFFRACTION | 3.5 | 4 |
Coloring options: