Equivalence class NR_4.0_11590.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2A8V|1|D (rep) | 5'-R(P*CP*CP*C)-3' | Escherichia coli | Bacteria | RHO TRANSCRIPTION TERMINATION FACTOR/RNA COMPLEX | X-ray diffraction | 2.4 | 1999-04-26 | ||
| 2 | 2FZ2|1|D | 5'-R(*CP*CP*C)-3' | Structure of Turnip Yellow Mosaic Virus at 100 K | X-ray diffraction | 2.9 | 2006-02-21 | ||||
| 3 | 2XPJ|1|D | 5'-R(CP*CP*CP)-3' | Crystal structure of Physalis Mottle Virus with intact ordered RNA | X-ray diffraction | 3.4 | 2010-09-15 | ||||
| 4 | 4X9E|1|G | RNA (5'-R(P*CP*CP*C)-3') | Escherichia coli | Bacteria | DEOXYGUANOSINETRIPHOSPHATE TRIPHOSPHOHYDROLASE from Escherichia coli with two DNA effector molecules | X-ray diffraction | 3.1 | 2015-02-25 | ||
| 5 | 4X9E|1|H | RNA (5'-R(P*CP*CP*C)-3') | Escherichia coli | Bacteria | DEOXYGUANOSINETRIPHOSPHATE TRIPHOSPHOHYDROLASE from Escherichia coli with two DNA effector molecules | X-ray diffraction | 3.1 | 2015-02-25 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2016-07-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_11590.1 | NR_all_58886.1 | 4.0 | (2) 2XPJ|1|D, 2FZ2|1|D | (3) 4X9E|1|H, 4X9E|1|G, 2A8V|1|D | (0) |
| NR_4.0_11590.1 | NR_all_87252.1 | 4.0 | (2) 4X9E|1|H, 4X9E|1|G | (3) 2FZ2|1|D, 2A8V|1|D, 2XPJ|1|D | (0) |
| NR_4.0_11590.1 | NR_all_99031.1 | 4.0 | (1) 2A8V|1|D | (4) 4X9E|1|H, 4X9E|1|G, 2XPJ|1|D, 2FZ2|1|D | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4X9E|1|G | Title: DEOXYGUANOSINETRIPHOSPHATE TRIPHOSPHOHYDROLASE from Escherichia coli with two DNA effector molecules | X-RAY DIFFRACTION | 3.1 | 3 | ||
| 2 | 4X9E|1|H | Title: DEOXYGUANOSINETRIPHOSPHATE TRIPHOSPHOHYDROLASE from Escherichia coli with two DNA effector molecules | X-RAY DIFFRACTION | 3.1 | 3 | ||
| 3 | 2A8V|1|D | Title: RHO TRANSCRIPTION TERMINATION FACTOR/RNA COMPLEX | X-RAY DIFFRACTION | 2.4 | 3 | ||
| 4 | 2XPJ|1|D | Title: Crystal structure of Physalis Mottle Virus with intact ordered RNA | X-RAY DIFFRACTION | 3.4 | 3 | ||
| 5 | 2FZ2|1|D | Title: Structure of Turnip Yellow Mosaic Virus at 100 K | X-RAY DIFFRACTION | 2.9 | 3 |
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