Equivalence class NR_4.0_08356.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5HR7|1|D (rep) | Transfer RNA | tRNA Glu | Escherichia coli | Bacteria | RF00005 | X-ray crystal structure of C118A RlmN from Escherichia coli with cross-linked in vitro transcribed tRNA | X-ray diffraction | 2.4 | 2016-04-13 |
| 2 | 5HR7|1|C | Transfer RNA | tRNA Glu | Escherichia coli | Bacteria | RF00005 | X-ray crystal structure of C118A RlmN from Escherichia coli with cross-linked in vitro transcribed tRNA | X-ray diffraction | 2.4 | 2016-04-13 |
| 3 | 2DER|1|D | Transfer RNA | tRNA | RF00005 | Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the initial tRNA binding state | X-ray diffraction | 3.1 | 2006-08-15 | ||
| 4 | 2DER|1|C | Transfer RNA | tRNA | RF00005 | Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the initial tRNA binding state | X-ray diffraction | 3.1 | 2006-08-15 | ||
| 5 | 2DET|1|C | Transfer RNA | tRNA | RF00005 | Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the pre-reaction state | X-ray diffraction | 3.4 | 2006-08-15 | ||
| 6 | 2DEU|1|C | Transfer RNA | tRNA | RF00005 | Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the adenylated intermediate state | X-ray diffraction | 3.4 | 2006-08-15 | ||
| 7 | 2DEU|1|D | Transfer RNA | tRNA | RF00005 | Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the adenylated intermediate state | X-ray diffraction | 3.4 | 2006-08-15 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2016-07-25 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2DER|1|D | Title: Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the initial tRNA binding state | X-RAY DIFFRACTION | 3.1 | 71 | ||
| 2 | 2DET|1|C | Title: Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the pre-reaction state | X-RAY DIFFRACTION | 3.4 | 70 | ||
| 3 | 2DEU|1|C | Title: Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the adenylated intermediate state | X-RAY DIFFRACTION | 3.4 | 74 | ||
| 4 | 2DEU|1|D | Title: Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the adenylated intermediate state | X-RAY DIFFRACTION | 3.4 | 74 | ||
| 5 | 2DER|1|C | Title: Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the initial tRNA binding state | X-RAY DIFFRACTION | 3.1 | 74 | ||
| 6 | 5HR7|1|C | Title: X-ray crystal structure of C118A RlmN from Escherichia coli with cross-linked in vitro transcribed tRNA | X-RAY DIFFRACTION | 2.4 | 70 | ||
| 7 | 5HR7|1|D | Title: X-ray crystal structure of C118A RlmN from Escherichia coli with cross-linked in vitro transcribed tRNA | X-RAY DIFFRACTION | 2.4 | 70 |
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