Equivalence class NR_4.0_07817.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4PQU|1|T (rep) | 5'-R(*AP*UP*GP*GP*UP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*UP*GP*UP*G)-3' | Crystal structure of HIV-1 Reverse Transcriptase in complex with RNA/DNA and dATP | X-ray diffraction | 2.51 | 2014-06-18 | ||||
| 2 | 4PQU|1|E | 5'-R(*AP*UP*GP*GP*UP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*UP*GP*UP*G)-3' | Crystal structure of HIV-1 Reverse Transcriptase in complex with RNA/DNA and dATP | X-ray diffraction | 2.51 | 2014-06-18 | ||||
| 3 | 4PWD|1|T | 5'-R(*AP*UP*GP*GP*UP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*AP*CP*AP*GP*GP*GP*AP*CP*UP*GP*U)-3' | Crystal structure of HIV-1 reverse transcriptase in complex with bulge-RNA/DNA and Nevirapine | X-ray diffraction | 3 | 2014-06-18 | ||||
| 4 | 4PWD|1|E | 5'-R(*AP*UP*GP*GP*UP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*AP*CP*AP*GP*GP*GP*AP*CP*UP*GP*U)-3' | Crystal structure of HIV-1 reverse transcriptase in complex with bulge-RNA/DNA and Nevirapine | X-ray diffraction | 3 | 2014-06-18 | ||||
| 5 | 4PUO|1|T | 5'-R(P*AP*UP*GP*GP*UP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*UP*GP*UP*G)-3' | Crystal structure of HIV-1 reverse transcriptase in complex with RNA/DNA and Nevirapine | X-ray diffraction | 2.9 | 2014-06-18 | ||||
| 6 | 4PUO|1|E | 5'-R(P*AP*UP*GP*GP*UP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*UP*GP*UP*G)-3' | Crystal structure of HIV-1 reverse transcriptase in complex with RNA/DNA and Nevirapine | X-ray diffraction | 2.9 | 2014-06-18 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2014-12-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4PQU|1|E | Title: Crystal structure of HIV-1 Reverse Transcriptase in complex with RNA/DNA and dATP | X-RAY DIFFRACTION | 2.51 | 21 | ||
| 2 | 4PQU|1|T | Title: Crystal structure of HIV-1 Reverse Transcriptase in complex with RNA/DNA and dATP | X-RAY DIFFRACTION | 2.51 | 21 | ||
| 3 | 4PUO|1|E | Title: Crystal structure of HIV-1 reverse transcriptase in complex with RNA/DNA and Nevirapine | X-RAY DIFFRACTION | 2.9 | 19 | ||
| 4 | 4PUO|1|T | Title: Crystal structure of HIV-1 reverse transcriptase in complex with RNA/DNA and Nevirapine | X-RAY DIFFRACTION | 2.9 | 20 | ||
| 5 | 4PWD|1|T | Title: Crystal structure of HIV-1 reverse transcriptase in complex with bulge-RNA/DNA and Nevirapine | X-RAY DIFFRACTION | 3 | 21 | ||
| 6 | 4PWD|1|E | Title: Crystal structure of HIV-1 reverse transcriptase in complex with bulge-RNA/DNA and Nevirapine | X-RAY DIFFRACTION | 3 | 20 |
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