Equivalence class NR_4.0_07053.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5D0A|1|F (rep) | RNA (5'-R(*G*CP*AP*GP*AP*CP*UP*GP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3') | Escherichia coli | Bacteria | Crystal structure of epoxyqueuosine reductase with cleaved RNA stem loop | X-ray diffraction | 2.1 | 2016-09-28 | ||
| 2 | 5D0A|1|E | RNA (5'-R(*G*CP*AP*GP*AP*CP*UP*GP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3') | Escherichia coli | Bacteria | Crystal structure of epoxyqueuosine reductase with cleaved RNA stem loop | X-ray diffraction | 2.1 | 2016-09-28 | ||
| 3 | 5T8Y|1|X | RNA (5'-R(*GP*CP*AP*GP*AP*CP*UP*GP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3') | Escherichia coli | Bacteria | Structure of epoxyqueuosine reductase from Bacillus subtilis with the Asp134 catalytic loop swung out of the active site. | X-ray diffraction | 2.65 | 2016-09-28 |
Release history
| Release | 8.0 | 9.0 | 9.1 | 9.2 | 9.3 | 9.4 | 9.5 | 9.6 | 9.7 | 9.8 | 9.9 | 9.10 | 9.11 | 9.12 | 9.13 | 9.14 | 9.15 | 9.16 | 9.17 | 9.18 | 9.19 | 9.20 | 9.21 | 9.22 | 9.23 | 9.24 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2017-04-05 | 2017-10-26 | 2017-11-07 | 2017-12-02 | 2017-12-13 | 2017-12-21 | 2017-12-22 | 2018-01-04 | 2018-01-05 | 2018-01-10 | 2018-01-11 | 2018-01-12 | 2018-01-28 | 2018-04-01 | 2018-04-01 | 2018-09-14 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-05 | 2018-12-12 | 2018-12-19 | 2018-12-26 | 2019-01-02 | 2019-01-09 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5T8Y|1|X | Title: Structure of epoxyqueuosine reductase from Bacillus subtilis with the Asp134 catalytic loop swung out of the active site. | X-RAY DIFFRACTION | 2.65 | 5 | ||
| 2 | 5D0A|1|E | Title: Crystal structure of epoxyqueuosine reductase with cleaved RNA stem loop | X-RAY DIFFRACTION | 2.1 | 12 | ||
| 3 | 5D0A|1|F | Title: Crystal structure of epoxyqueuosine reductase with cleaved RNA stem loop | X-RAY DIFFRACTION | 2.1 | 14 |
Coloring options: