Equivalence class NR_4.0_05679.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1QA6|1|D (rep) | Large subunit ribosomal RNA fragment | 58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN | RF02541 | CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | X-ray diffraction | 2.8 | 1999-05-25 | ||
| 2 | 1QA6|1|C | Large subunit ribosomal RNA fragment | 58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN | RF02541 | CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | X-ray diffraction | 2.8 | 1999-05-25 | ||
| 3 | 1HC8|1|C | Large subunit ribosomal RNA fragment | 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN | Escherichia coli | Bacteria | RF02541 | CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | X-ray diffraction | 2.8 | 2002-05-23 |
| 4 | 1Y39|1|C | Large subunit ribosomal RNA fragment | 58 Nucleotide Ribosomal 23S RNA Domain | RF02541 | Co-evolution of protein and RNA structures within a highly conserved ribosomal domain | X-ray diffraction | 2.8 | 2005-03-22 | ||
| 5 | 1HC8|1|D | Large subunit ribosomal RNA fragment | 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN | Escherichia coli | Bacteria | RF02541 | CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | X-ray diffraction | 2.8 | 2002-05-23 |
| 6 | 1Y39|1|D | Large subunit ribosomal RNA fragment | 58 Nucleotide Ribosomal 23S RNA Domain | RF02541 | Co-evolution of protein and RNA structures within a highly conserved ribosomal domain | X-ray diffraction | 2.8 | 2005-03-22 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1Y39|1|C | Title: Co-evolution of protein and RNA structures within a highly conserved ribosomal domain | X-RAY DIFFRACTION | 2.8 | 57 | ||
| 2 | 1HC8|1|C | Title: CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | X-RAY DIFFRACTION | 2.8 | 57 | ||
| 3 | 1QA6|1|C | Title: CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | X-RAY DIFFRACTION | 2.8 | 58 | ||
| 4 | 1QA6|1|D | Title: CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | X-RAY DIFFRACTION | 2.8 | 58 | ||
| 5 | 1HC8|1|D | Title: CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX | X-RAY DIFFRACTION | 2.8 | 57 | ||
| 6 | 1Y39|1|D | Title: Co-evolution of protein and RNA structures within a highly conserved ribosomal domain | X-RAY DIFFRACTION | 2.8 | 57 |
Coloring options: