Equivalence class NR_4.0_05044.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5DDP|1|B (rep) | Glutamine riboswitch | RNA (61-MER) | Synechococcus elongatus | Bacteria | RF01739 | L-glutamine riboswitch bound with L-glutamine | X-ray diffraction | 2.3 | 2015-12-23 |
| 2 | 5DDQ|1|B | Glutamine riboswitch | L-glutamine riboswitch RNA (61-MER) | Synechococcus elongatus | Bacteria | RF01739 | L-glutamine riboswitch bound with L-glutamine soaked with Mn2+ | X-ray diffraction | 2.4 | 2015-12-23 |
| 3 | 5DDQ|1|A | Glutamine riboswitch | L-glutamine riboswitch RNA (61-MER) | Synechococcus elongatus | Bacteria | RF01739 | L-glutamine riboswitch bound with L-glutamine soaked with Mn2+ | X-ray diffraction | 2.4 | 2015-12-23 |
| 4 | 5DDP|1|A | Glutamine riboswitch | RNA (61-MER) | Synechococcus elongatus | Bacteria | RF01739 | L-glutamine riboswitch bound with L-glutamine | X-ray diffraction | 2.3 | 2015-12-23 |
| 5 | 5DDR|1|B | Glutamine riboswitch | L-glutamine riboswitch RNA (61-MER) | Synechococcus elongatus | Bacteria | RF01739 | L-glutamine riboswitch bound with L-glutamine soaked with Cs+ | X-ray diffraction | 2.61 | 2015-12-23 |
| 6 | 5DDR|1|A | Glutamine riboswitch | L-glutamine riboswitch RNA (61-MER) | Synechococcus elongatus | Bacteria | RF01739 | L-glutamine riboswitch bound with L-glutamine soaked with Cs+ | X-ray diffraction | 2.61 | 2015-12-23 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 5DDR|1|A | Title: L-glutamine riboswitch bound with L-glutamine soaked with Cs+ | X-RAY DIFFRACTION | 2.61 | 61 | ||
| 2 | 5DDR|1|B | Title: L-glutamine riboswitch bound with L-glutamine soaked with Cs+ | X-RAY DIFFRACTION | 2.61 | 61 | ||
| 3 | 5DDP|1|A | Title: L-glutamine riboswitch bound with L-glutamine | X-RAY DIFFRACTION | 2.3 | 61 | ||
| 4 | 5DDQ|1|A | Title: L-glutamine riboswitch bound with L-glutamine soaked with Mn2+ | X-RAY DIFFRACTION | 2.4 | 61 | ||
| 5 | 5DDQ|1|B | Title: L-glutamine riboswitch bound with L-glutamine soaked with Mn2+ | X-RAY DIFFRACTION | 2.4 | 61 | ||
| 6 | 5DDP|1|B | Title: L-glutamine riboswitch bound with L-glutamine | X-RAY DIFFRACTION | 2.3 | 61 |
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