Equivalence class NR_4.0_03506.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3S1R|1|R (rep) | RNA (5'-R(*AP*GP*AP*GP*G*)-3') | RNA Polymerase II Initiation Complex with a 5-nt 3'-deoxy RNA soaked with GTP | X-ray diffraction | 3.2 | 2011-08-10 | ||||
| 2 | 3RZD|1|R | RNA (5'-R(*AP*GP*AP*GP*G)-3') | RNA Polymerase II Initiation Complex with a 5-nt RNA | X-ray diffraction | 3.3 | 2011-08-10 | ||||
| 3 | 3S1Q|1|R | RNA (5'-R(*AP*GP*AP*GP*G)-3') | RNA Polymerase II Initiation Complex with a 5-nt 3'-deoxy RNA soaked with ATP | X-ray diffraction | 3.3 | 2011-08-10 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_03506.1 | NR_4.0_42976.1 | 6.0 | (1) 3S1R|1|R | (2) 3RZD|1|R, 3S1Q|1|R | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3RZD|1|R | Title: RNA Polymerase II Initiation Complex with a 5-nt RNA | X-RAY DIFFRACTION | 3.3 | 5 | ||
| 2 | 3S1Q|1|R | Title: RNA Polymerase II Initiation Complex with a 5-nt 3'-deoxy RNA soaked with ATP | X-RAY DIFFRACTION | 3.3 | 5 | ||
| 3 | 3S1R|1|R | Title: RNA Polymerase II Initiation Complex with a 5-nt 3'-deoxy RNA soaked with GTP | X-RAY DIFFRACTION | 3.2 | 5 |
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