Equivalence class NR_4.0_03381.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1K8W|1|B (rep) | 5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*UP*(FHU)P*CP*GP*AP*UP*CP*CP*CP*GP*UP*UP*GP*C)-3' | Crystal structure of the E. coli pseudouridine synthase TruB bound to a T stem-loop RNA | X-ray diffraction | 1.85 | 2001-12-31 | ||||
| 2 | 1ZL3|1|B | 5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*UP*(FLO) UP*CP*GP*AP*UP*CP*CP*CP*GP*UP*UP*GP*C)-3' | Coupling of active site motions and RNA binding | X-ray diffraction | 2.8 | 2005-08-09 | ||||
| 3 | 1ZE2|1|C | 5'-R(*GP*GP*CP*CP*AP*CP*GP*GP*UP*(FHU)P*CP*GP*AP*AP*UP*CP*CP*GP*UP*GP*GP*C)-3' | Conformational change of pseudouridine 55 synthase upon its association with RNA substrate | X-ray diffraction | 3 | 2005-04-26 | ||||
| 4 | 1ZE2|1|D | 5'-R(*GP*GP*CP*CP*AP*CP*GP*GP*UP*(FHU)P*CP*GP*AP*AP*UP*CP*CP*GP*UP*GP*GP*C)-3' | Conformational change of pseudouridine 55 synthase upon its association with RNA substrate | X-ray diffraction | 3 | 2005-04-26 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1K8W|1|B | Title: Crystal structure of the E. coli pseudouridine synthase TruB bound to a T stem-loop RNA | X-RAY DIFFRACTION | 1.85 | 21 | ||
| 2 | 1ZL3|1|B | Title: Coupling of active site motions and RNA binding | X-RAY DIFFRACTION | 2.8 | 21 | ||
| 3 | 1ZE2|1|D | Title: Conformational change of pseudouridine 55 synthase upon its association with RNA substrate | X-RAY DIFFRACTION | 3 | 21 | ||
| 4 | 1ZE2|1|C | Title: Conformational change of pseudouridine 55 synthase upon its association with RNA substrate | X-RAY DIFFRACTION | 3 | 21 |
Coloring options: