Equivalence class NR_4.0_01541.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1MFQ|1|A (rep) | Signal recognition particle RNA | 7S RNA of human SRP | Homo sapiens | Eukarya | RF00017 | Crystal Structure Analysis of a Ternary S-Domain Complex of Human Signal Recognition Particle | X-ray diffraction | 3.1 | 2002-09-20 |
| 2 | 4P3E|1|A | Signal recognition particle RNA | SRP RNA (124-mer) | Homo sapiens | Eukarya | RF00017 | Structure of the human SRP S domain | X-ray diffraction | 3.5 | 2014-04-16 |
| 3 | 3KTV|1|C | Signal recognition particle RNA | SRP RNA | Homo sapiens | Eukarya | RF00017 | Crystal structure of the human SRP19/S-domain SRP RNA complex | X-ray diffraction | 3.8 | 2010-02-16 |
| 4 | 3KTV|1|A | Signal recognition particle RNA | SRP RNA | Homo sapiens | Eukarya | RF00017 | Crystal structure of the human SRP19/S-domain SRP RNA complex | X-ray diffraction | 3.8 | 2010-02-16 |
| 5 | 5M73|1|E | Signal recognition particle RNA | Human gene for small cytoplasmic 7SL RNA (7L30.1) | Homo sapiens | Eukarya | RF00017 | Structure of the human SRP S domain with SRP72 RNA-binding domain | X-ray diffraction | 3.4 | 2016-12-07 |
| 6 | 5M73|1|A | Signal recognition particle RNA | Human gene for small cytoplasmic 7SL RNA (7L30.1) | Homo sapiens | Eukarya | RF00017 | Structure of the human SRP S domain with SRP72 RNA-binding domain | X-ray diffraction | 3.4 | 2016-12-07 |
| 7 | 1L9A|1|B | Signal recognition particle RNA | signal recognition particle RNA S domain | RF00017 | CRYSTAL STRUCTURE OF SRP19 IN COMPLEX WITH THE S DOMAIN OF SIGNAL RECOGNITION PARTICLE RNA | X-ray diffraction | 2.9 | 2002-06-28 |
Release history
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_01541.1 | NR_4.0_21331.1 | 9.16 | (1) 1L9A|1|B | (6) 5M73|1|E, 1MFQ|1|A, 3KTV|1|C, 5M73|1|A, 3KTV|1|A, 4P3E|1|A | (0) |
| NR_4.0_01541.1 | NR_4.0_46712.1 | 9.16 | (4) 3KTV|1|C, 1MFQ|1|A, 4P3E|1|A, 3KTV|1|A | (3) 1L9A|1|B, 5M73|1|E, 5M73|1|A | (0) |
| NR_4.0_01541.1 | NR_4.0_58629.1 | 9.16 | (2) 5M73|1|A, 5M73|1|E | (5) 3KTV|1|C, 1L9A|1|B, 3KTV|1|A, 4P3E|1|A, 1MFQ|1|A | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 4P3E|1|A | Title: Structure of the human SRP S domain | X-RAY DIFFRACTION | 3.5 | 130 | ||
| 2 | 3KTV|1|C | Title: Crystal structure of the human SRP19/S-domain SRP RNA complex | X-RAY DIFFRACTION | 3.8 | 107 | ||
| 3 | 3KTV|1|A | Title: Crystal structure of the human SRP19/S-domain SRP RNA complex | X-RAY DIFFRACTION | 3.8 | 108 | ||
| 4 | 1MFQ|1|A | Title: Crystal Structure Analysis of a Ternary S-Domain Complex of Human Signal Recognition Particle | X-RAY DIFFRACTION | 3.1 | 127 | ||
| 5 | 5M73|1|A | Title: Structure of the human SRP S domain with SRP72 RNA-binding domain | X-RAY DIFFRACTION | 3.4 | 144 | ||
| 6 | 5M73|1|E | Title: Structure of the human SRP S domain with SRP72 RNA-binding domain | X-RAY DIFFRACTION | 3.4 | 144 | ||
| 7 | 1L9A|1|B | Title: CRYSTAL STRUCTURE OF SRP19 IN COMPLEX WITH THE S DOMAIN OF SIGNAL RECOGNITION PARTICLE RNA | X-RAY DIFFRACTION | 2.9 | 125 |
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