#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15TBW|1|AS (rep)5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction32017-07-26
25TBW|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction32017-07-26
34V88|1|A35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction32014-07-09
44V88|1|A75S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction32014-07-09
55I4L|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-ray diffraction3.12016-06-22
65MEI|1|AS5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Agelastatin A bound to the 80S ribosomeX-ray diffraction3.52017-06-28
75ON6|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of haemanthamine bound to the 80S ribosomeX-ray diffraction3.12018-02-28
85MEI|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Agelastatin A bound to the 80S ribosomeX-ray diffraction3.52017-06-28
95ON6|1|AS5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of haemanthamine bound to the 80S ribosomeX-ray diffraction3.12018-02-28
105OBM|1|75S ribosomal RNA5S Ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-ray diffraction3.42017-12-13
115LYB|1|75S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
125I4L|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-ray diffraction3.12016-06-22
135LYB|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
145OBM|1|35S ribosomal RNA5S Ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-ray diffraction3.42017-12-13
155NDW|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
165NDW|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
175NDV|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-ray diffraction3.32017-12-13
185NDV|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-ray diffraction3.32017-12-13
195NDG|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
205NDG|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
215TGM|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.52017-01-18
225TGM|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.52017-01-18
234V7R|1|B25S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Yeast 80S ribosome.X-ray diffraction42014-07-09
244V7R|1|D25S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Yeast 80S ribosome.X-ray diffraction42014-07-09
255DAT|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing eIF5AX-ray diffraction3.152016-08-31
265DGV|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.12016-12-14
275DGF|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.32016-12-14
285DAT|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing eIF5AX-ray diffraction3.152016-08-31
295DGV|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.12016-12-14
305DGE|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-ray diffraction3.452017-01-25
315TGA|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.32016-11-23
325DC3|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with non-modified eIF5AX-ray diffraction3.252016-06-01
335DGE|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-ray diffraction3.452017-01-25
345DC3|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with non-modified eIF5AX-ray diffraction3.252016-06-01
355TGA|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.32016-11-23
365DGF|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.32016-12-14
374U4R|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.82014-10-22
384U3U|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.92014-10-22
394U4R|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.82014-10-22
404U3U|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.92014-10-22
414U4Q|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
424U4Q|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
434U3M|1|75S ribosomal RNA5.8s rRNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
444U52|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
454U3M|1|35S ribosomal RNA5.8s rRNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
464U4U|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
474U6F|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
484U52|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
494U4U|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
504U4N|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Edeine bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
514U6F|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
523JCT|1|35S ribosomal RNARDN5-2 rRNASaccharomyces cerevisiaeEukaryaRF00001Cryo-em structure of eukaryotic pre-60S ribosomal subunitsElectron microscopy3.082016-06-01
534U3N|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
544U4Z|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
554U4N|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Edeine bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
564U4Z|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
574U55|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
584U50|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
595T62|1|B5S ribosomal RNA5S Ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 ComplexElectron microscopy3.32017-02-08
605M1J|1|345S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Nonstop ribosomal complex bound with Dom34 and Hbs1Electron microscopy3.32017-01-18
614U50|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
624U3N|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
634U4Y|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
644U4Y|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
654U51|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
664U55|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
675H4P|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1Electron microscopy3.072017-01-25
684U53|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-ray diffraction3.32014-10-22
695APO|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1Electron microscopy3.412015-12-16
704U51|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
714U53|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-ray diffraction3.32014-10-22
725JUP|1|D5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)Electron microscopy3.52016-10-05
734U56|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-ray diffraction3.452014-10-22
744U56|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-ray diffraction3.452014-10-22
756GQB|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)Electron microscopy3.92018-07-11
765MC6|1|BR5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiaeElectron microscopy3.82017-01-18
775JUT|1|D5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)Electron microscopy42016-10-05
786FT6|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactorsElectron microscopy3.92018-03-28
795JUO|1|D5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)Electron microscopy42016-10-05
805JUU|1|D5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)Electron microscopy42016-10-05
816GQV|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)Electron microscopy42018-07-11
825APN|1|75S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1Electron microscopy3.912015-12-16
834U4O|1|75S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Geneticin bound to the yeast 80S ribosomeX-ray diffraction3.62014-10-22
845JUS|1|D5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit)Electron microscopy4.22016-10-05
855T6R|1|B5S ribosomal RNA5S Ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 ComplexElectron microscopy4.22017-02-08
864U4O|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Crystal structure of Geneticin bound to the yeast 80S ribosomeX-ray diffraction3.62014-10-22
874V8Y|1|B75S ribosomal RNA5S RIBOSOMAL RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexElectron microscopy4.32014-07-09
885GAK|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5AElectron microscopy3.882016-02-24
896GQ1|1|35S ribosomal RNA5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)Electron microscopy4.42018-07-11
903J6Y|1|5S5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)Electron microscopy6.12014-06-11
913J6X|1|5S5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)Electron microscopy6.12014-06-11
923J77|1|5S5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)Electron microscopy6.22014-08-06
933J78|1|5S5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)Electron microscopy6.32014-08-06
944V8Z|1|B75S ribosomal RNA5S RIBOSOMAL RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexElectron microscopy6.62014-07-09
954V8T|1|75S ribosomal RNA5S RIBOSOMAL RNASaccharomyces cerevisiaeEukaryaRF00001Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1Electron microscopy8.12014-07-09
964V7F|1|35S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Arx1 pre-60S particle.Electron microscopy8.72014-07-09
975JCS|1|z5S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLEElectron microscopy9.52016-11-16
984V6I|1|DC5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosomeElectron microscopy8.82014-07-09

Release history

Release9.199.20
Date2018-12-052018-12-12

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
14V6I|1|DCTitle: Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosomeELECTRON MICROSCOPY8.8118
25JCS|1|zTitle: CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLEELECTRON MICROSCOPY9.5121
33J78|1|5STitle: Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.3121
43J77|1|5STitle: Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)ELECTRON MICROSCOPY6.2121
53J6Y|1|5STitle: S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)ELECTRON MICROSCOPY6.1121
63J6X|1|5STitle: S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)ELECTRON MICROSCOPY6.1121
75T62|1|BTitle: Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 ComplexELECTRON MICROSCOPY3.3121
85T6R|1|BTitle: Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 ComplexELECTRON MICROSCOPY4.2121
96GQV|1|3Title: Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)ELECTRON MICROSCOPY4121
106GQB|1|3Title: Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)ELECTRON MICROSCOPY3.9121
116GQ1|1|3Title: Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)ELECTRON MICROSCOPY4.4121
125H4P|1|3Title: Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1ELECTRON MICROSCOPY3.07121
133JCT|1|3Title: Cryo-em structure of eukaryotic pre-60S ribosomal subunitsELECTRON MICROSCOPY3.08121
145M1J|1|34Title: Nonstop ribosomal complex bound with Dom34 and Hbs1ELECTRON MICROSCOPY3.3121
155GAK|1|3Title: Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5AELECTRON MICROSCOPY3.88121
165MC6|1|BRTitle: Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiaeELECTRON MICROSCOPY3.8121
175APO|1|7Title: Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1ELECTRON MICROSCOPY3.41121
185APN|1|7Title: Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1ELECTRON MICROSCOPY3.91121
195NDW|1|7Title: Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.7121
205NDG|1|7Title: Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.7121
214V8T|1|7Title: Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1ELECTRON MICROSCOPY8.1121
224V8Y|1|B7Title: Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexELECTRON MICROSCOPY4.3121
234V8Z|1|B7Title: Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexELECTRON MICROSCOPY6.6121
244V88|1|A7Title: The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION3121
254U3U|1|7Title: Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.9121
264U4R|1|7Title: Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.8121
274U3M|1|7Title: Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
284U4Y|1|7Title: Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
294U55|1|7Title: Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
304U4Z|1|7Title: Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
314U3N|1|7Title: Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
325I4L|1|7Title: Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
334U4N|1|7Title: Crystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
344U4Q|1|7Title: Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
354U4U|1|7Title: Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
364U53|1|7Title: Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.3121
374U51|1|7Title: Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
384U50|1|7Title: Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
394U56|1|7Title: Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.45121
405TGA|1|7Title: Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.3121
415LYB|1|7Title: Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.25121
425DC3|1|7Title: Complex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.25121
435DGE|1|7Title: Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-RAY DIFFRACTION3.45121
444U6F|1|7Title: Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
455DGV|1|7Title: Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.1121
465DGF|1|7Title: Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.3121
475DAT|1|7Title: Complex of yeast 80S ribosome with hypusine-containing eIF5AX-RAY DIFFRACTION3.15121
484U52|1|7Title: Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
495TGM|1|7Title: Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.5121
504U4O|1|7Title: Crystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.6121
515MEI|1|ASTitle: Crystal structure of Agelastatin A bound to the 80S ribosomeX-RAY DIFFRACTION3.5121
525ON6|1|ASTitle: Crystal structure of haemanthamine bound to the 80S ribosomeX-RAY DIFFRACTION3.1121
535TBW|1|ASTitle: Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
545NDV|1|7Title: Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.3121
555NDV|1|3Title: Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.3121
564U4O|1|3Title: Crystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.6121
575TGM|1|3Title: Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.5121
585DGF|1|3Title: Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.3121
595DC3|1|3Title: Complex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.25121
605DGE|1|3Title: Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-RAY DIFFRACTION3.45121
615NDG|1|3Title: Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.7121
625NDW|1|3Title: Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.7121
634U56|1|3Title: Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.45121
644U6F|1|3Title: Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
654U52|1|3Title: Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
665ON6|1|3Title: Crystal structure of haemanthamine bound to the 80S ribosomeX-RAY DIFFRACTION3.1121
674U51|1|3Title: Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
684U55|1|3Title: Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
694U3N|1|3Title: Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
704U4Z|1|3Title: Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
714U4N|1|3Title: Crystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
724U4Q|1|3Title: Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
734U4U|1|3Title: Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
744U3M|1|3Title: Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
754U4R|1|3Title: Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.8121
764V88|1|A3Title: The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION3121
774U3U|1|3Title: Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.9121
785TBW|1|3Title: Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3121
794U4Y|1|3Title: Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
805I4L|1|3Title: Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.1121
814U53|1|3Title: Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.3121
824U50|1|3Title: Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.2121
835MEI|1|3Title: Crystal structure of Agelastatin A bound to the 80S ribosomeX-RAY DIFFRACTION3.5121
845DAT|1|3Title: Complex of yeast 80S ribosome with hypusine-containing eIF5AX-RAY DIFFRACTION3.15121
855TGA|1|3Title: Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.3121
865LYB|1|3Title: Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.25121
875DGV|1|3Title: Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.1121
885OBM|1|3Title: Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.4121
895OBM|1|7Title: Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.4121
905JUP|1|DTitle: Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)ELECTRON MICROSCOPY3.5121
915JUU|1|DTitle: Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)ELECTRON MICROSCOPY4121
925JUT|1|DTitle: Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)ELECTRON MICROSCOPY4121
935JUS|1|DTitle: Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit)ELECTRON MICROSCOPY4.2121
945JUO|1|DTitle: Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)ELECTRON MICROSCOPY4121
956FT6|1|3Title: Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactorsELECTRON MICROSCOPY3.9121
964V7R|1|D2Title: Yeast 80S ribosome.X-RAY DIFFRACTION4121
974V7R|1|B2Title: Yeast 80S ribosome.X-RAY DIFFRACTION4121
984V7F|1|3Title: Arx1 pre-60S particle.ELECTRON MICROSCOPY8.7121

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