Equivalence class NR_20.0_67656.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6EM3|1|2 (rep) | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | Electron microscopy | 3.2 | 2017-12-27 |
| 2 | 6EM4|1|2 | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | Electron microscopy | 4.1 | 2017-12-27 |
| 3 | 6EM5|1|2 | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | Electron microscopy | 4.3 | 2017-12-27 |
| 4 | 4V7F|1|2 | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | Arx1 pre-60S particle. | Electron microscopy | 8.7 | 2014-07-09 |
| 5 | 5FL8|1|y | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE | Electron microscopy | 9.5 | 2015-12-02 |
| 6 | 5JCS|1|y | 5.8S ribosomal RNA | 5.8S ribosomal RNA | Saccharomyces cerevisiae | Eukarya | RF00002 | CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE | Electron microscopy | 9.5 | 2016-11-16 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 6EM3|1|2 | Title: State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | ELECTRON MICROSCOPY | 3.2 | 157 | ||
| 2 | 5FL8|1|y | Title: CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE | ELECTRON MICROSCOPY | 9.5 | 158 | ||
| 3 | 4V7F|1|2 | Title: Arx1 pre-60S particle. | ELECTRON MICROSCOPY | 8.7 | 158 | ||
| 4 | 5JCS|1|y | Title: CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE | ELECTRON MICROSCOPY | 9.5 | 158 | ||
| 5 | 6EM4|1|2 | Title: State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | ELECTRON MICROSCOPY | 4.1 | 158 | ||
| 6 | 6EM5|1|2 | Title: State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | ELECTRON MICROSCOPY | 4.3 | 158 |
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