Equivalence class NR_20.0_05937.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6A5L|1|P (rep) | RNA (5'-R(P*GP*GP*UP*GP*UP*CP*UP*UP*GP*GP*G)-3') | synthetic construct | Synthetic | RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA | Electron microscopy | 5.6 | 2018-10-03 | ||
| 2 | 6A5T|1|P | RNA (5'-R(P*GP*GP*UP*GP*UP*CP*UP*UP*GP*GP*G)-3') | synthetic construct | Synthetic | RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome | Electron microscopy | 6.7 | 2018-10-03 | ||
| 3 | 6A5U|1|P | RNA (5'-R(P*GP*GP*UP*GP*UP*CP*UP*UP*GP*GP*G)-3') | synthetic construct | Synthetic | RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA, tilt conformation | Electron microscopy | 7.6 | 2018-10-03 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 6A5L|1|P | Title: RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA | ELECTRON MICROSCOPY | 5.6 | 11 | ||
| 2 | 6A5T|1|P | Title: RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome | ELECTRON MICROSCOPY | 6.7 | 11 | ||
| 3 | 6A5U|1|P | Title: RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA, tilt conformation | ELECTRON MICROSCOPY | 7.6 | 11 |
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