Equivalence class NR_2.5_70634.3 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2XZL|1|B (rep) | 5- R(*UP*UP*UP*UP*UP*UP*UP*UP*U) -3 | synthetic construct | Synthetic | Upf1-RNA complex | X-ray diffraction | 2.4 | 2011-03-30 | ||
| 2 | 5EV1|1|B | DNA/RNA (5'-R(*UP*UP*U)-D(P*UP*UP*(BRU)P*U)-R(P*UP*U)-3') | synthetic construct | Structure I of Intact U2AF65 Recognizing a 3' Splice Site Signal | X-ray diffraction | 2.04 | 2016-02-24 |
Release history
| Release | 9.15 |
|---|---|
| Date | 2018-11-09 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_2.5_70634.3 | NR_2.5_70634.2 | 9.15 | (2) 2XZL|1|B, 5EV1|1|B | (0) | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_2.5_70634.3 | NR_2.5_81044.1 | 9.16 | (1) 5EV1|1|B | (1) 2XZL|1|B | (0) |
| NR_2.5_70634.3 | NR_2.5_91565.1 | 9.16 | (1) 2XZL|1|B | (1) 5EV1|1|B | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2XZL|1|B | Title: Upf1-RNA complex | X-RAY DIFFRACTION | 2.4 | 9 | ||
| 2 | 5EV1|1|B | Title: Structure I of Intact U2AF65 Recognizing a 3' Splice Site Signal | X-RAY DIFFRACTION | 2.04 | 4 |
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