Equivalence class NR_2.0_32448.2 Current
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1ZCI|1|A+ 1ZCI|1|B (rep) | 5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3' | HIV-1 DIS RNA subtype F- monoclinic form | X-ray diffraction | 1.65 | 2006-01-31 | ||||
2 | 1ZCI|1|C+ 1ZCI|1|D | 5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3' | HIV-1 DIS RNA subtype F- monoclinic form | X-ray diffraction | 1.65 | 2006-01-31 | ||||
3 | 2FD0|1|A+ 2FD0|1|B | HIV-1 DIS RNA | HIV-1 DIS kissing-loop in complex with lividomycin | X-ray diffraction | 1.8 | 2006-05-16 | ||||
4 | 2FCX|1|A+ 2FCX|1|B | HIV-1 DIS RNA | HIV-1 DIS kissing-loop in complex with neamine | X-ray diffraction | 2 | 2006-05-16 | ||||
5 | 1XPE|1|A+ 1XPE|1|B | 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3' | HIV-1 subtype B genomic RNA Dimerization Initiation Site | X-ray diffraction | 1.94 | 2005-10-18 |
Release history
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|---|---|---|---|---|
NR_2.0_32448.2 | NR_2.0_32448.1 | 9.16 | (5) 1XPE|1|A+1XPE|1|B, 1ZCI|1|A+1ZCI|1|B, 1ZCI|1|C+1ZCI|1|D, 2FCX|1|A+2FCX|1|B, 2FD0|1|A+2FD0|1|B | (0) | (0) |
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 1ZCI|1|C+1ZCI|1|D | Title: HIV-1 DIS RNA subtype F- monoclinic form | X-RAY DIFFRACTION | 1.65 | 22 | ||
2 | 1ZCI|1|A+1ZCI|1|B | Title: HIV-1 DIS RNA subtype F- monoclinic form | X-RAY DIFFRACTION | 1.65 | 22 | ||
3 | 1XPE|1|A+1XPE|1|B | Title: HIV-1 subtype B genomic RNA Dimerization Initiation Site | X-RAY DIFFRACTION | 1.94 | 23 | ||
4 | 2FCX|1|A+2FCX|1|B | Title: HIV-1 DIS kissing-loop in complex with neamine | X-RAY DIFFRACTION | 2 | 22 | ||
5 | 2FD0|1|A+2FD0|1|B | Title: HIV-1 DIS kissing-loop in complex with lividomycin | X-RAY DIFFRACTION | 1.8 | 22 |
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