Equivalence class DNA_all_82221.1 Current
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1NTS|1|A (rep) | 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3' | 5'(dCCPUPCPCPUPUP)3':3'(rAGGAGGAAA)5', where P=propynyl | Solution NMR | 2003-06-10 | |||||
2 | 1NTQ|1|A | 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3' | 5'(dCCUCCUU)3':3'(rAGGAGGAAA)5' | Solution NMR | 2003-06-10 | |||||
3 | 1NTT|1|A | 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3' | 5'(dCPCPUPCPCPUPUP)3':(rAGGAGGAAA)5', where P=propynyl | Solution NMR | 2003-06-10 |
Release history
Release | 0.1 | 0.2 | 0.3 | 0.4 | 0.5 | 0.6 | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 0.13 | 0.14 | 0.15 | 0.16 | 0.17 | 0.18 | 0.19 | 0.20 | 0.21 | 0.22 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2011-02-05 | 2011-02-12 | 2011-02-16 | 2011-02-19 | 2011-02-26 | 2011-03-05 | 2011-03-12 | 2011-03-19 | 2011-03-26 | 2011-04-02 | 2011-04-09 | 2011-04-11 | 2011-04-16 | 2011-04-23 | 2011-04-30 | 2011-05-07 | 2011-05-14 | 2011-05-21 | 2011-05-28 | 2011-06-04 | 2011-06-11 | 2011-06-18 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 1NTT|1|A | 5'(dCPCPUPCPCPUPUP)3':(rAGGAGGAAA)5', where P=propynyl | SOLUTION NMR | 9 | A-form double helix,double helix,structure | ||
2 | 1NTS|1|A | 5'(dCCPUPCPCPUPUP)3':3'(rAGGAGGAAA)5', where P=propynyl | SOLUTION NMR | 9 | A-form double helix,double helix,structure | ||
3 | 1NTQ|1|A | 5'(dCCUCCUU)3':3'(rAGGAGGAAA)5' | SOLUTION NMR | 9 | A-form double helix,double helix,structure |
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