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Equivalence class DNA_all_71834.2 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
12VE9|1|I+ 2VE9|1|J (rep)5'-D(*AP*CP*CP*AP*GP*GP*GP*CP*AP*GP *GP*GP*CP*GP*AP*C)-3', 5'-D(*GP*TP*CP*GP*CP*CP*CP*TP*GP*CP *CP*CP*TP*GP*GP*T)-3'Pseudomonas aeruginosaXray structure of KOPS bound gamma domain of FtsK (P. aeruginosa)X-ray diffraction1.92008-09-09
22VE9|1|K+ 2VE9|1|L5'-D(*AP*CP*CP*AP*GP*GP*GP*CP*AP*GP *GP*GP*CP*GP*AP*C)-3', 5'-D(*GP*TP*CP*GP*CP*CP*CP*TP*GP*CP *CP*CP*TP*GP*GP*T)-3'Pseudomonas aeruginosaXray structure of KOPS bound gamma domain of FtsK (P. aeruginosa)X-ray diffraction1.92008-09-09
33OHB|1|T+ 3OHB|1|P5'-D(*TP*AP*AP*TP*GP*(8OG)P*AP*GP*GP*GP*GP*AP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*TP*CP*CP*CP*CP*TP*(DOC))-3'Yeast DNA polymerase eta extending from an 8-oxoG lesionX-ray diffraction22010-12-22
41L3S|1|C+ 1L3S|1|B5'-D(*GP*A*CP*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*G)-3'Crystal Structure of Bacillus DNA Polymerase I Fragment complexed to 9 base pairs of duplex DNA.X-ray diffraction1.72003-03-25
52HHV|1|C+ 2HHV|1|B5'-D(*GP*TP*AP*CP*(6OG)P*AP*GP*CP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*GP*CP*TP*TP*G)-3'T:O6-methyl-guanine in the polymerase-2 basepair positionX-ray diffraction1.552006-12-12
63BS1|1|B+ 3BS1|1|CDNA (5'-D(*DTP*DTP*DTP*DAP*DAP*DCP*DAP*DGP*DTP*DTP*DAP*DAP*DGP*(BRU)P*DAP*DT)-3'), DNA (5'-D(*DAP*DAP*(BRU)P*DAP*DCP*DTP*DTP*DAP*DAP*DCP*DTP*DGP*DTP*DTP*DAP*DA)-3')Structure of the Staphylococcus aureus AgrA LytTR Domain Bound to DNA Reveals a Beta Fold with a Novel Mode of BindingX-ray diffraction1.62008-04-08
73LAP|1|G+ 3LAP|1|H5'-D(*TP*TP*GP*CP*AP*TP*AP*AP*CP*GP*AP*TP*GP*CP*AP*A)-3', 5'-D(*TP*TP*GP*CP*AP*TP*CP*GP*TP*TP*AP*TP*GP*CP*AP*A)-3'The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-canavanine.X-ray diffraction2.152010-05-05
83LAP|1|I+ 3LAP|1|J5'-D(*TP*TP*GP*CP*AP*TP*AP*AP*CP*GP*AP*TP*GP*CP*AP*A)-3', 5'-D(*TP*TP*GP*CP*AP*TP*CP*GP*TP*TP*AP*TP*GP*CP*AP*A)-3'The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-canavanine.X-ray diffraction2.152010-05-05
93LAP|1|K+ 3LAP|1|L5'-D(*TP*TP*GP*CP*AP*TP*AP*AP*CP*GP*AP*TP*GP*CP*AP*A)-3', 5'-D(*TP*TP*GP*CP*AP*TP*CP*GP*TP*TP*AP*TP*GP*CP*AP*A)-3'The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-canavanine.X-ray diffraction2.152010-05-05
102FMP|1|T+ 2FMP|1|P+ 2FMP|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'DNA Polymerase beta with a terminated gapped DNA substrate and ddCTP with sodium in the catalytic siteX-ray diffraction1.652006-04-25
111L3T|1|C+ 1L3T|1|B5'-D(*GP*AP*CP*G*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*T)-3'Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 10 base pairs of duplex DNA following addition of a single dTTP residueX-ray diffraction1.72003-03-25
123ISD|1|T+ 3ISD|1|P+ 3ISD|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', 5'-D(*CP*CP*GP*AP*CP*(3DR)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'synthetic constructTernary complex of human DNA polymerase beta with an abasic site (THF): DAPCPP mismatchX-ray diffraction2.62009-09-15
131L3V|1|C+ 1L3V|1|B5'-D(*GP*AP*CP*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*TP*AP*CP*GP*TP*C)-3'Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 15 base pairs of duplex DNA following addition of dTTP, dATP, dCTP, and dGTP residues.X-ray diffraction1.712003-03-25
143JPQ|1|T+ 3JPQ|1|P+ 3JPQ|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monoBromo methylene triphosphateX-ray diffraction1.92010-06-02
151NK5|1|C+ 1NK5|1|BDNA TEMPLATE STRAND, DNA PRIMER STRANDADENINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITEX-ray diffraction2.12004-03-30
163LAJ|1|G+ 3LAJ|1|H5'-D(*TP*TP*GP*CP*AP*TP*AP*AP*CP*GP*AP*TP*GP*CP*AP*A)-3', 5'-D(*TP*TP*GP*CP*AP*TP*CP*GP*TP*TP*AP*TP*GP*CP*AP*A)-3'The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-arginine.X-ray diffraction2.3062010-05-05
173LAJ|1|I+ 3LAJ|1|J5'-D(*TP*TP*GP*CP*AP*TP*AP*AP*CP*GP*AP*TP*GP*CP*AP*A)-3', 5'-D(*TP*TP*GP*CP*AP*TP*CP*GP*TP*TP*AP*TP*GP*CP*AP*A)-3'The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-arginine.X-ray diffraction2.3062010-05-05
183LAJ|1|K+ 3LAJ|1|L5'-D(*TP*TP*GP*CP*AP*TP*AP*AP*CP*GP*AP*TP*GP*CP*AP*A)-3', 5'-D(*TP*TP*GP*CP*AP*TP*CP*GP*TP*TP*AP*TP*GP*CP*AP*A)-3'The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-arginine.X-ray diffraction2.3062010-05-05
191L5U|1|C+ 1L5U|1|B5'-D(*GP*A*CP*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*TP*AP*C)-3'Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 12 base pairs of duplex DNA following addition of a dTTP, a dATP, and a dCTP residue.X-ray diffraction1.952003-03-25
201NK4|1|C+ 1NK4|1|BDNA TEMPLATE STRAND, DNA PRIMER STRANDGUANINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITEX-ray diffraction1.62004-03-30
212AQ4|1|T+ 2AQ4|1|P5'-D(*TP*AP*AP*GP*GP*TP*AP*GP*GP*GP*GP*AP*GP*GP*AP*T)-3', 5'-D(*AP*TP*CP*CP*TP*CP*CP*CP*CP*TP*AP*C)-3'Ternary complex of the catalytic core of REV1 with DNA and dCTP.X-ray diffraction2.322005-10-04
221L1T|1|B+ 1L1T|1|C5'-D(*AP*G*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*AP*(HPD)P*GP*TP*CP*TP*AP*CP*C)-3'MutM (Fpg) Bound to Abasic-Site Containing DNAX-ray diffraction1.82002-06-14
231L3U|1|C+ 1L3U|1|B5'-D(*GP*AP*C*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*TP*A)-3'Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 11 base pairs of duplex DNA following addition of a dTTP and a dATP residue.X-ray diffraction1.82003-03-25
242HHU|1|C+ 2HHU|1|B5'-D(*GP*TP*AP*CP*(6OG)P*GP*GP*CP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*GP*CP*CP*C)-3'C:O6-methyl-guanine in the polymerase postinsertion site (-1 basepair position)X-ray diffraction1.82006-12-12
251L2D|1|B+ 1L2D|1|C5'-D(*AP*G*GP*TP*AP*GP*AP*CP*GP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*AP*(HPD)P*GP*TP*CP*TP*AP*CP*C)-3'MutM (Fpg)-DNA Estranged Guanine Mismatch Recognition ComplexX-ray diffraction22002-06-14
263M8R|1|C+ 3M8R|1|BDNA (5'-D(*AP*AP*AP*AP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3')Crystal structure of the large fragment of DNA polymerase I from Thermus aquaticus in a closed ternary complex with trapped 4'-ethylated dTTPX-ray diffraction22010-07-07
273IAY|1|T+ 3IAY|1|P5'-D(*TP*AP*AP*GP*GP*TP*AP*GP*GP*GP*GP*AP*GP*GP*AP*T)-3', 5'-D(*AP*TP*CP*CP*TP*CP*CP*CP*CP*TP*AP*(DOC))-3'Ternary complex of DNA polymerase deltaX-ray diffraction22009-09-22
283ISC|1|T+ 3ISC|1|P+ 3ISC|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', 5'-D(*CP*CP*GP*AP*CP*(3DR)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'synthetic constructBinary complex of human DNA polymerase beta with an abasic site (THF) in the gapped DNAX-ray diffraction22009-09-15
292HHT|1|C+ 2HHT|1|B5'-D(*GP*TP*AP*CP*(6OG)P*AP*GP*CP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*GP*CP*TP*CP*G)-3'C:O6-methyl-guanine pair in the polymerase-2 basepair positionX-ray diffraction2.052006-12-12
301L1Z|1|B+ 1L1Z|1|C5'-D(*AP*G*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*AP*(PED)P*GP*TP*CP*TP*AP*CP*C)-3'MutM (Fpg) Covalent-DNA IntermediateX-ray diffraction1.72002-06-14
311NKE|1|C+ 1NKE|1|BDNA TEMPLATE STRAND, DNA PRIMER STRANDA BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A CYTOSINE-THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP.X-ray diffraction1.82004-03-30
323JPS|1|T+ 3JPS|1|P+ 3JPS|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-fluoro methyl methylene triphosphateX-ray diffraction22010-06-02
332FMS|1|T+ 2FMS|1|P+ 2FMS|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', 5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'DNA Polymerase beta with a gapped DNA substrate and dUMPNPP with magnesium in the catalytic siteX-ray diffraction22006-04-25
343M8S|1|C+ 3M8S|1|BDNA (5'-D(*AP*AP*AP*AP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3')Crystal structure of the large fragment of DNA polymerase I from Thermus aquaticus in a closed ternary complex with trapped 4'-methylated dTTPX-ray diffraction2.22010-07-07
351N48|1|C+ 1N48|1|B5'-D(*CP*AP*(3DR)P*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3'Y-family DNA polymerase Dpo4 in complex with DNA containing abasic lesionX-ray diffraction2.22004-02-24
362F5O|1|B+ 2F5O|1|C5'-D(*AP*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*GP*GP*AP*TP*CP*TP*AP*CP*C)-3'MutM crosslinked to undamaged DNA sampling G:C base pair IC3X-ray diffraction2.052006-03-07
373JPN|1|T+ 3JPN|1|P+ 3JPN|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-dichloro methylene triphosphateX-ray diffraction2.152010-06-02
382EWJ|1|B+ 2EWJ|1|C5'-D(*T*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*CP*T)-3', 5'-D(*TP*G*AP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- Locked formX-ray diffraction2.72006-05-03
392E42|1|C+ 2E42|1|DDNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3'), DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3')Crystal structure of C/EBPbeta Bzip homodimer V285A mutant bound to A High Affinity DNA fragmentX-ray diffraction1.82007-12-18
402F5N|1|B+ 2F5N|1|C5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*AP*GP*GP*TP*CP*TP*AP*CP*C)-3'MutM crosslinked to undamaged DNA sampling A:T base pair IC1X-ray diffraction22006-03-07
411NJY|1|C+ 1NJY|1|BDNA TEMPLATE STRAND, DNA PRIMER STRANDTHYMINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITEX-ray diffraction22004-03-30
422F5P|1|C+ 2F5P|1|D5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*G*TP*CP*CP*AP*AP*GP*TP*CP*TP*AP*CP*C)-3'MutM crosslinked to undamaged DNA sampling A:T base pair IC2X-ray diffraction22006-03-07
431NJZ|1|C+ 1NJZ|1|BDNA TEMPLATE STRAND, DNA PRIMER STRANDCYTOSINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITEX-ray diffraction22004-03-30
443MBY|1|T+ 3MBY|1|P+ 3MBY|1|DDNA (5'-D(P*GP*TP*CP*GP*G)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3'), DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')Ternary complex of DNA Polymerase BETA with template base A and 8oxodGTP in the active site with a dideoxy terminated primerX-ray diffraction22010-06-09
451TV9|1|T+ 1TV9|1|P+ 1TV9|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3', 5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE ADENINE AND INCOMING CYTIDINEX-ray diffraction22004-11-23
463JPO|1|T+ 3JPO|1|P+ 3JPO|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monochloromethylene triphosphateX-ray diffraction22010-06-02
471L2C|1|B+ 1L2C|1|C5'-D(*AP*G*GP*TP*AP*GP*AP*CP*TP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*AP*(HPD)P*GP*TP*CP*TP*AP*CP*C)-3'MutM (Fpg)-DNA Estranged Thymine Mismatch Recognition ComplexX-ray diffraction2.22002-06-14
482FMQ|1|B+ 2FMQ|1|C+ 2FMQ|1|D5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3'Sodium in active site of DNA Polymerase BetaX-ray diffraction2.22006-04-25
493LWL|1|C+ 3LWL|1|BDNA (5'-D(*AP*AP*AP*(3DR)P*TP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(2DA))-3')Structure of Klenow fragment of Taq polymerase in complex with an abasic siteX-ray diffraction2.252010-05-05
501ZJN|1|T+ 1ZJN|1|P+ 1ZJN|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3', d(*CP*CP*GP*AP*CP*CP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Human DNA Polymerase beta complexed with DNA containing an A-A mismatched primer terminus with dGTPX-ray diffraction2.612005-08-16
511ZJM|1|T+ 1ZJM|1|P+ 1ZJM|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3', d(*CP*CP*GP*AP*CP*CP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Human DNA Polymerase beta complexed with DNA containing an A-A mismatched primer terminusX-ray diffraction2.12005-08-16
523JPR|1|T+ 3JPR|1|P+ 3JPR|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-dimethyl methylene triphosphateX-ray diffraction2.12010-06-02
532GEQ|1|C+ 2GEQ|1|D5'-D(*GP*CP*GP*TP*GP*AP*GP*CP*AP*TP*GP*CP*TP*CP*AP*C)-3'Crystal Structure of a p53 Core Dimer Bound to DNAX-ray diffraction2.32006-05-23
543JPT|1|T+ 3JPT|1|P+ 3JPT|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-fluoro chloro methylene triphosphateX-ray diffraction2.152010-06-02
552HW3|1|C+ 2HW3|1|B5'-D(*GP*TP*A*CP*(6OG)P*AP*GP*CP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*GP*CP*TP*T)-3'T:O6-methyl-guanine pair in the polymerase postinsertion site (-1 basepair position)X-ray diffraction1.982006-12-12
561N4L|1|B+ 1N4L|1|D5'-D(*CP*TP*TP*TP*TP*TP*AP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3', 5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*TP*AP*AP*AP*AP*AP*G)-3'A DNA analogue of the polypurine tract of HIV-1X-ray diffraction22003-06-24
573MFH|1|T+ 3MFH|1|P5'-D(*TP*AP*AP*TP*TP*GP*AP*GP*GP*GP*GP*AP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*TP*CP*CP*CP*CP*TP*(DOC))-3'DNA Polymerase Eta in Complex With Undamaged DNAX-ray diffraction22010-06-23
582NOB|1|B+ 2NOB|1|C5'-D(*T*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*G*CP*GP*TP*CP*CP*AP*(G42)P*GP*TP*CP*TP*AP*CP*C)-3'Structure of catalytically inactive H270A human 8-oxoguanine glycosylase crosslinked to 8-oxoguanine DNAX-ray diffraction2.12006-11-21
592PXI|1|T+ 2PXI|1|P+ 2PXI|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monofluoromethylene triphosphateX-ray diffraction2.12008-01-08
603ERE|1|A+ 3ERE|1|B5'-D(*DTP*DTP*DGP*DCP*DAP*DTP*DAP*DAP*DCP*DGP*DAP*DTP*DGP*DCP*DAP*DA)-3', 5'-D(*DTP*DTP*DGP*DCP*DAP*DTP*DCP*DGP*DTP*DTP*DAP*DTP*DGP*DCP*DAP*DA)-3'Crystal structure of the arginine repressor protein from Mycobacterium tuberculosis in complex with the DNA operatorX-ray diffraction2.52008-10-14
612F5Q|1|B+ 2F5Q|1|C5'-D(*AP*GP*G*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*G*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3'Catalytically inactive (E3Q) MutM crosslinked to oxoG:C containing DNA CC2X-ray diffraction2.352006-03-07
623GDX|1|T+ 3GDX|1|P+ 3GDX|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', 5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Dna polymerase beta with a gapped DND substrate and dTMP(CF2)PPX-ray diffraction2.22009-05-05
632FVP|1|B5'-D(*TP*TP*TP*CP*AP*TP*TP*GP*CP*AP*AP*TP*GP*AP*AP*A)-3'A Structural Study of the CA Dinucleotide Step in the Integrase Processing Site of Moloney Murine Leukemia VirusX-ray diffraction2.252006-12-12
643CO6|1|A+ 3CO6|1|BDNA (5'-D(*DTP*DGP*DGP*DTP*DTP*DTP*DGP*DTP*DTP*DTP*DAP*DCP*DCP*DTP*DTP*DG)-3'), DNA (5'-D(*DCP*DAP*DAP*DGP*DGP*DTP*DAP*DAP*DAP*DCP*DAP*DAP*DAP*DCP*DCP*DA)-3')Crystal Structure of FoxO1 DBD Bound to DBE1 DNAX-ray diffraction2.12008-09-16
652E43|1|C+ 2E43|1|DDNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3'), DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3')Crystal structure of C/EBPbeta Bzip homodimer K269A mutant bound to A High Affinity DNA fragmentX-ray diffraction2.12007-12-18
663JPP|1|T+ 3JPP|1|P+ 3JPP|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-MonoMethyl Methylene triphosphateX-ray diffraction2.12010-06-02
672FVQ|1|B5'-D(*CP*TP*TP*TP*CP*AP*TP*TP*AP*AP*TP*GP*AP*AP*AP*G)-3'A Structural Study of the CA Dinucleotide Step in the Integrase Processing Site of Moloney Murine Leukemia VirusX-ray diffraction2.32006-12-12
682WT7|1|C+ 2WT7|1|DMODIFIED T-MARE MOTIFsynthetic constructCrystal structure of the bZIP heterodimeric complex MafB:cFos bound to DNAX-ray diffraction2.32010-09-29
693C2M|1|T+ 3C2M|1|P+ 3C2M|1|DDNA (5'-D(P*DGP*DTP*DCP*DGP*DG)-3'), DNA (5'-D(*DGP*DCP*DTP*DGP*DAP*DTP*DGP*DCP*DGP*DC)-3'), DNA (5'-D(*DCP*DCP*DGP*DAP*DCP*DGP*DGP*DCP*DGP*DCP*DAP*DTP*DCP*DAP*DGP*DC)-3')Ternary complex of DNA POLYMERASE BETA with a G:dAPCPP mismatch in the active siteX-ray diffraction2.152008-05-20
702F5S|1|B+ 2F5S|1|C5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*(8OG)P*AP*GP*TP*CP*TP*AP*CP*C)-3'Catalytically inactive (E3Q) MutM crosslinked to oxoG:C containing DNA CC1X-ray diffraction2.352006-03-07
713ISB|1|T+ 3ISB|1|P+ 3ISB|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Binary complex of human DNA polymerase beta with a gapped DNAX-ray diffraction22009-09-15
723COA|1|A+ 3COA|1|BDNA (5'-D(*DTP*DGP*DGP*DTP*DTP*DTP*DGP*DTP*DTP*DTP*DTP*DGP*DCP*DTP*DTP*DG)-3'), DNA (5'-D(*DCP*DAP*DAP*DGP*DCP*DAP*DAP*DAP*DAP*DCP*DAP*DAP*DAP*DCP*DCP*DA)-3')Crystal Structure of FoxO1 DBD Bound to IRE DNAX-ray diffraction2.22008-09-16
732FVR|1|B5'-D(*TP*CP*TP*TP*TP*CP*AP*TP*AP*TP*GP*AP*AP*AP*GP*A)-3'A Structural Study of the CA Dinucleotide Step in the Integrase Processing Site of Moloney Murine Leukemia VirusX-ray diffraction2.22006-12-12
743JTG|1|B+ 3JTG|1|CDNA (5'-D(*GP*AP*GP*GP*AP*GP*TP*TP*TP*CP*CP*TP*GP*TP*TP*T)-3'), DNA (5'-D(*CP*AP*AP*AP*CP*AP*GP*GP*AP*AP*AP*CP*TP*CP*CP*T)-3')Crystal structure of mouse Elf3 C-terminal DNA-binding domain in complex with type II TGF-beta receptor promoter DNAX-ray diffraction2.22010-01-12
753COA|1|D+ 3COA|1|EDNA (5'-D(*DTP*DGP*DGP*DTP*DTP*DTP*DGP*DTP*DTP*DTP*DTP*DGP*DCP*DTP*DTP*DG)-3'), DNA (5'-D(*DCP*DAP*DAP*DGP*DCP*DAP*DAP*DAP*DAP*DCP*DAP*DAP*DAP*DCP*DCP*DA)-3')Crystal Structure of FoxO1 DBD Bound to IRE DNAX-ray diffraction2.22008-09-16
761L2B|1|B+ 1L2B|1|C+ 1L2B|1|D5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*GP*TP*CP*C*(AD2))-3', 5'-D(P*GP*TP*CP*TP*AP*CP*C)-3'MutM (Fpg) DNA End-Product StructureX-ray diffraction2.42002-06-14
772C6Y|1|C+ 2C6Y|1|DINTERLEUKIN 2 PROMOTORHomo sapiensCrystal structure of interleukin enhancer-binding factor 1 bound to DNAX-ray diffraction2.42006-04-18
781LQ1|1|E+ 1LQ1|1|F5'-D(*TP*TP*CP*GP*TP*GP*TP*CP*GP*AP*AP*TP*TP*TP*TP*G)-3', 5'-D(*AP*CP*AP*AP*AP*AP*TP*TP*CP*GP*AP*CP*AP*CP*GP*A)-3'DNA Complexed Structure of the Key Transcription Factor Initiating Development in Sporulation BacteriaX-ray diffraction2.32002-08-23
791LQ1|1|G+ 1LQ1|1|H5'-D(*TP*TP*CP*GP*TP*GP*TP*CP*GP*AP*AP*TP*TP*TP*TP*G)-3', 5'-D(*AP*CP*AP*AP*AP*AP*TP*TP*CP*GP*AP*CP*AP*CP*GP*A)-3'DNA Complexed Structure of the Key Transcription Factor Initiating Development in Sporulation BacteriaX-ray diffraction2.32002-08-23
801S0M|1|D+ 1S0M|1|C5'-D(P*AP*TP*AP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*CP*A)-3', 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*T)-3'Crystal structure of a Benzo[a]pyrene Diol Epoxide adduct in a ternary complex with a DNA polymeraseX-ray diffraction2.72004-03-30
811S0M|1|F+ 1S0M|1|E5'-D(P*AP*TP*AP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*CP*A)-3', 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*T)-3'Crystal structure of a Benzo[a]pyrene Diol Epoxide adduct in a ternary complex with a DNA polymeraseX-ray diffraction2.72004-03-30
822FVS|1|B5'-D(*CP*AP*CP*AP*AP*TP*GP*AP*TP*CP*AP*TP*TP*GP*TP*G)-3'A Structural Study of the CA Dinucleotide Step in the Integrase Processing Site of Moloney Murine Leukemia VirusX-ray diffraction2.352006-12-12
832RDJ|1|D+ 2RDJ|1|CDNA (5'-D(P*DTP*DTP*DAP*DTP*DTP*DCP*DGP*DAP*DAP*DGP*DGP*DGP*DTP*DCP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DGP*DAP*DCP*DCP*DCP*DTP*DTP*DCP*DGP*DAP*DAP*DT)-3')Snapshots of a Y-family DNA polymerase in replication: Dpo4 in apo and binary/ternary complex formsX-ray diffraction2.22008-06-24
843C2K|1|T+ 3C2K|1|P+ 3C2K|1|DDNA (5'-D(P*DGP*DTP*DCP*DGP*DG)-3'), DNA (5'-D(*DGP*DCP*DTP*DGP*DAP*DTP*DGP*DCP*DGP*DC)-3'), DNA (5'-D(*DCP*DCP*DGP*DAP*DCP*DAP*DGP*DCP*DGP*DCP*DAP*DTP*DCP*DAP*DGP*DC)-3')DNA POLYMERASE BETA with a gapped DNA substrate and DUMPNPP with Manganese in the active siteX-ray diffraction2.42008-05-20
851RYR|1|C+ 1RYR|1|B5'-D(*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTIONX-ray diffraction2.282004-02-10
863IGC|1|D+ 3IGC|1|B+ 3IGC|1|C5'-D(*GP*TP*GP*TP*CP*GP*CP*CP*CP*TP*T)-3', 5'-D(*AP*TP*TP*CP*C)-3', 5'-D(*CP*GP*GP*AP*AP*TP*AP*AP*GP*GP*GP*CP*GP*AP*CP*A)-3'Smallpox virus topoisomerase-DNA transition stateX-ray diffraction2.12010-03-02
871JXL|1|T+ 1JXL|1|P5'-D(*T*TP*CP*GP*AP*AP*(BRU)P*CP*CP*TP*(BRU)P*CP*CP*CP*CP*C)-3', 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3'Crystal Structure of a Y-Family DNA Polymerase in a Ternary Complex with DNA Substrates and an Incoming NucleotideX-ray diffraction2.12001-10-05
883N7B|1|D+ 3N7B|1|CDNA (5'-D(*AP*GP*TP*CP*CP*CP*CP*CP*GP*GP*TP*GP*GP*AP*CP*T)-3'), DNA (5'-D(*AP*GP*TP*CP*CP*AP*CP*CP*GP*GP*GP*GP*GP*AP*CP*T)-3')SgrAI bound to secondary site DNA and Ca(II)X-ray diffraction2.652010-11-24
893GQC|1|F+ 3GQC|1|E5'-D(*TP*AP*AP*GP*GP*TP*AP*GP*GP*GP*GP*AP*GP*GP*AP*T)-3', 5'-D(*AP*TP*CP*CP*TP*CP*CP*CP*CP*TP*AP*(DOC))-3'Structure of human Rev1-DNA-dNTP ternary complexX-ray diffraction2.52009-05-19
903GQC|1|H+ 3GQC|1|G5'-D(*TP*AP*AP*GP*GP*TP*AP*GP*GP*GP*GP*AP*GP*GP*AP*T)-3', 5'-D(*AP*TP*CP*CP*TP*CP*CP*CP*CP*TP*AP*(DOC))-3'Structure of human Rev1-DNA-dNTP ternary complexX-ray diffraction2.52009-05-19
913GQC|1|J+ 3GQC|1|I5'-D(*TP*AP*AP*GP*GP*TP*AP*GP*GP*GP*GP*AP*GP*GP*AP*T)-3', 5'-D(*AP*TP*CP*CP*TP*CP*CP*CP*CP*TP*AP*(DOC))-3'Structure of human Rev1-DNA-dNTP ternary complexX-ray diffraction2.52009-05-19
923GQC|1|L+ 3GQC|1|K5'-D(*TP*AP*AP*GP*GP*TP*AP*GP*GP*GP*GP*AP*GP*GP*AP*T)-3', 5'-D(*AP*TP*CP*CP*TP*CP*CP*CP*CP*TP*AP*(DOC))-3'Structure of human Rev1-DNA-dNTP ternary complexX-ray diffraction2.52009-05-19
932I06|1|B+ 2I06|1|C5'-D(*T*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*CP*T)-3', 5'-D(*TP*G*AP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- Locked formX-ray diffraction2.22007-08-21
941TVA|1|T+ 1TVA|1|P+ 1TVA|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3', 5'-D(*CP*CP*GP*AP*CP*TP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE THYMIDINE AND INCOMING CYTIDINEX-ray diffraction2.62004-11-23
953OA6|1|C+ 3OA6|1|DDNA (5'-D(*GP*CP*TP*AP*GP*GP*TP*CP*AP*AP*AP*GP*GP*TP*CP*A)-3'), DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*TP*TP*GP*AP*CP*CP*TP*AP*G)-3')Human MSL3 Chromodomain bound to DNA and H4K20me1 peptideX-ray diffraction2.352010-08-18
963OA6|1|E+ 3OA6|1|FDNA (5'-D(*GP*CP*TP*AP*GP*GP*TP*CP*AP*AP*AP*GP*GP*TP*CP*A)-3'), DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*TP*TP*GP*AP*CP*CP*TP*AP*G)-3')Human MSL3 Chromodomain bound to DNA and H4K20me1 peptideX-ray diffraction2.352010-08-18
973F27|1|A+ 3F27|1|BDNA (5'-D(*DGP*DTP*DCP*DTP*DCP*DTP*DAP*DTP*DTP*DGP*DTP*DCP*DCP*DTP*DGP*DG)-3'), DNA (5'-D(*DCP*DCP*DAP*DGP*DGP*DAP*DCP*DAP*DAP*DTP*DAP*DGP*DAP*DGP*DAP*DC)-3')Structure of Sox17 Bound to DNAX-ray diffraction2.752009-04-07
982QL2|1|E+ 2QL2|1|FDNA (5'-D(*DTP*DAP*DGP*DGP*DCP*DCP*DAP*DTP*DCP*DTP*DGP*DGP*DTP*DCP*DCP*DT)-3'), DNA (5'-D(*DAP*DGP*DGP*DAP*DCP*DCP*DAP*DGP*DAP*DTP*DGP*DGP*DCP*DCP*DTP*DA)-3')Crystal Structure of the basic-helix-loop-helix domains of the heterodimer E47/NeuroD1 bound to DNAX-ray diffraction2.52008-11-04
992QL2|1|G+ 2QL2|1|HDNA (5'-D(*DTP*DAP*DGP*DGP*DCP*DCP*DAP*DTP*DCP*DTP*DGP*DGP*DTP*DCP*DCP*DT)-3'), DNA (5'-D(*DAP*DGP*DGP*DAP*DCP*DCP*DAP*DGP*DAP*DTP*DGP*DGP*DCP*DCP*DTP*DA)-3')Crystal Structure of the basic-helix-loop-helix domains of the heterodimer E47/NeuroD1 bound to DNAX-ray diffraction2.52008-11-04
1003LK9|1|T+ 3LK9|1|P+ 3LK9|1|DDNA (5'-D(P*GP*TP*CP*GP*G)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')DNA polymerase beta with a gapped DNA substrate and dTMP(CF2)P(CF2)PX-ray diffraction2.52011-01-12
1013C2L|1|T+ 3C2L|1|P+ 3C2L|1|DDNA (5'-D(P*DGP*DTP*DCP*DGP*DG)-3'), DNA (5'-D(*DGP*DCP*DTP*DGP*DAP*DTP*DGP*DCP*DGP*DC)-3'), DNA (5'-D(*DCP*DCP*DGP*DAP*DCP*DCP*DGP*DCP*DGP*DCP*DAP*DTP*DCP*DAP*DGP*DC)-3')Ternary complex of DNA POLYMERASE BETA with a C:DAPCPP mismatch in the active siteX-ray diffraction2.62008-05-20
1022IVK|1|I+ 2IVK|1|J5'-D(*GP*AP*AP*TP*TP*CP*GP*AP*TP*CP *GP*AP*AP*TP*TP*C)-3'synthetic constructCrystal structure of the periplasmic endonuclease Vvn complexed with a 16-bp DNAX-ray diffraction2.92007-01-02
1033CO7|1|A+ 3CO7|1|BDNA (5'-D(*DTP*DCP*DTP*DTP*DGP*DTP*DTP*DTP*DAP*DCP*DAP*DTP*DTP*DTP*DTP*DG)-3'), DNA (5'-D(*DCP*DAP*DAP*DAP*DAP*DTP*DGP*DTP*DAP*DAP*DAP*DCP*DAP*DAP*DGP*DA)-3')Crystal Structure of FoxO1 DBD Bound to DBE2 DNAX-ray diffraction2.912008-09-16
1043CO7|1|D+ 3CO7|1|EDNA (5'-D(*DTP*DCP*DTP*DTP*DGP*DTP*DTP*DTP*DAP*DCP*DAP*DTP*DTP*DTP*DTP*DG)-3'), DNA (5'-D(*DCP*DAP*DAP*DAP*DAP*DTP*DGP*DTP*DAP*DAP*DAP*DCP*DAP*DAP*DGP*DA)-3')Crystal Structure of FoxO1 DBD Bound to DBE2 DNAX-ray diffraction2.912008-09-16
1053N78|1|D+ 3N78|1|CDNA (5'-D(*AP*GP*TP*CP*CP*CP*CP*CP*GP*GP*TP*GP*GP*AP*CP*T)-3'), DNA (5'-D(*AP*GP*TP*CP*CP*AP*CP*CP*GP*GP*GP*GP*GP*AP*CP*T)-3')SgrAI bound to Secondary Site DNA and Mg(II)X-ray diffraction2.952010-11-24
1063OQM|1|B+ 3OQM|1|E5'-D(*TP*TP*GP*AP*TP*AP*AP*CP*GP*CP*TP*TP*AP*CP*AP*A)-3', 5'-D(*TP*TP*GP*TP*AP*AP*GP*CP*GP*TP*TP*AP*TP*CP*AP*A)-3'Bacillus subtilisstructure of ccpa-hpr-ser46p-ackA2 complexX-ray diffraction2.962010-12-08
1071RZR|1|B+ 1RZR|1|E5'-D(*CP*TP*GP*TP*TP*AP*GP*CP*GP*CP*TP*TP*TP*CP*AP*G)-3', 5'-D(*CP*TP*GP*AP*AP*AP*GP*CP*GP*CP*TP*AP*AP*CP*AP*G)-3'crystal structure of transcriptional regulator-phosphoprotein-DNA complexX-ray diffraction2.82004-10-12
1081RZR|1|H+ 1RZR|1|R5'-D(*CP*TP*GP*AP*AP*AP*GP*CP*GP*CP*TP*AP*AP*CP*AP*G)-3', 5'-D(*CP*TP*GP*TP*TP*AP*GP*CP*GP*CP*TP*TP*TP*CP*AP*G)-3'crystal structure of transcriptional regulator-phosphoprotein-DNA complexX-ray diffraction2.82004-10-12
1091CIT|1|B+ 1CIT|1|CDNA (5'-D(*CP*CP*GP*AP*AP*AP*AP*GP*GP*TP*CP*AP*TP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*AP*TP*GP*AP*CP*CP*TP*TP*TP*TP*CP*GP*G)-3')DNA-BINDING MECHANISM OF THE MONOMERIC ORPHAN NUCLEAR RECEPTOR NGFI-BX-ray diffraction2.71999-05-03
1101XSD|1|B5'-D(P*TP*AP*CP*TP*AP*CP*AP*TP*AP*TP*GP*TP*AP*GP*TP*A)-3'Crystal structure of the BlaI repressor in complex with DNAX-ray diffraction2.72005-03-29
1111YFH|1|D+ 1YFH|1|E5'-D(*GP*TP*GP*GP*AP*TP*GP*(XCY)P*GP*TP*GP*TP*AP*GP*GP*T)-3', 5'-D(*CP*CP*TP*AP*CP*AP*CP*AP*CP*AP*TP*CP*CP*AP*CP*A)-3'wt Human O6-Alkylguanine-DNA Alkyltransferase Bound To DNA Containing an Alkylated CytosineX-ray diffraction3.012005-12-13
1121YFH|1|F+ 1YFH|1|G5'-D(*GP*TP*GP*GP*AP*TP*GP*(XCY)P*GP*TP*GP*TP*AP*GP*GP*T)-3', 5'-D(*CP*CP*TP*AP*CP*AP*CP*AP*CP*AP*TP*CP*CP*AP*CP*A)-3'wt Human O6-Alkylguanine-DNA Alkyltransferase Bound To DNA Containing an Alkylated CytosineX-ray diffraction3.012005-12-13
1132WTU|1|E+ 2WTU|1|FDNAsynthetic constructCrystal structure of Escherichia coli MutS in complex with a 16 basepair oligo containing an A.A mismatch.X-ray diffraction3.42010-02-09
1143OQN|1|B+ 3OQN|1|E5'-D(*AP*TP*GP*GP*TP*AP*CP*CP*GP*CP*TP*TP*TP*CP*AP*A)-3', 5'-D(*TP*TP*GP*AP*AP*AP*GP*CP*GP*GP*TP*AP*CP*CP*AP*T)-3'Bacillus subtilisStructure of ccpa-hpr-ser46-p-gntr-down creX-ray diffraction3.32010-12-08
1152I05|1|B+ 2I05|1|C5'-D(*T*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*CP*T)-3', 5'-D(*TP*AP*GP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'Escherichia Coli Replication Terminator Protein (Tus) Complexed With TerA DNAX-ray diffraction2.62007-08-21
1161ZVV|1|ODNA recognition strand CRECrystal structure of a ccpa-crh-dna complexX-ray diffraction2.982006-02-07
1171ZVV|1|RDNA recognition strand CRECrystal structure of a ccpa-crh-dna complexX-ray diffraction2.982006-02-07
1181ZVV|1|TDNA recognition strand CRECrystal structure of a ccpa-crh-dna complexX-ray diffraction2.982006-02-07
1192QNF|1|C+ 2QNF|1|DDNA (5'-D(*DCP*DAP*DCP*DAP*DTP*DCP*DGP*DAP*DTP*DGP*DGP*DAP*DGP*DCP*DCP*DG)-3'), DNA (5'-D(*DGP*DCP*DGP*DCP*DTP*DCP*DCP*DAP*DTP*DCP*DGP*DAP*DTP*DGP*DTP*DG)-3')Crystal structure of T4 Endonuclease VII H43N mutant in complex with heteroduplex DNA containing base mismatchesX-ray diffraction32008-01-29
1203MFK|1|C+ 3MFK|1|Dstromelysin-1 promoter DNAEts1 complex with stromelysin-1 promoter DNAX-ray diffraction32010-08-18
1212QNF|1|E+ 2QNF|1|FDNA (5'-D(*DCP*DGP*DGP*DCP*DTP*DCP*DCP*DAP*DTP*DCP*DGP*DAP*DTP*DGP*DTP*DG)-3'), DNA (5'-D(*DCP*DAP*DCP*DAP*DTP*DCP*DGP*DAP*DTP*DGP*DGP*DAP*DGP*DCP*DGP*DC)-3')Crystal structure of T4 Endonuclease VII H43N mutant in complex with heteroduplex DNA containing base mismatchesX-ray diffraction32008-01-29
1222NTZ|1|E+ 2NTZ|1|U5'-D(*CP*GP*TP*GP*AP*AP*AP*TP*CP*GP*CP*CP*AP*CP*GP*A)-3', 5'-D(*TP*CP*GP*TP*GP*GP*CP*GP*AP*TP*TP*TP*CP*AP*CP*G)-3'Structure of a ParB-DNA complex reveals a double B-box interactionX-ray diffraction3.352007-02-20
1232NTZ|1|W+ 2NTZ|1|Y5'-D(*TP*CP*GP*TP*GP*GP*CP*GP*AP*TP*TP*TP*CP*AP*CP*G)-3', 5'-D(*CP*GP*TP*GP*AP*AP*AP*TP*CP*GP*CP*CP*AP*CP*GP*A)-3'Structure of a ParB-DNA complex reveals a double B-box interactionX-ray diffraction3.352007-02-20
1242D45|1|E+ 2D45|1|F5'-D(P*TP*AP*CP*TP*AP*CP*AP*TP*AP*TP*GP*TP*AP*GP*TP*A)-3'Crystal structure of the MecI-mecA repressor-operator complexX-ray diffraction3.82005-10-25
1252D45|1|G+ 2D45|1|H5'-D(P*TP*AP*CP*TP*AP*CP*AP*TP*AP*TP*GP*TP*AP*GP*TP*A)-3'Crystal structure of the MecI-mecA repressor-operator complexX-ray diffraction3.82005-10-25
1261DFM|1|C+ 1DFM|1|DDNA (5'-D(*TP*AP*TP*TP*AP*TP*AP*GP*AP*TP*CP*TP*AP*TP*AP*A)-3')Crystal structure of restriction endonuclease BGLII complexed with DNA 16-merX-ray diffraction1.52000-02-21
1271DP7|1|DDNA (5'-D(*CP*GP*(BRU)P*TP*AP*CP*CP*AP*(BRU)P*GP*GP*TP*AP*AP*CP*G)-3')COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITEX-ray diffraction1.52000-03-06
1283G9M|1|C+ 3G9M|1|DDNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*TP*TP*GP*TP*CP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*GP*AP*CP*AP*AP*AP*AP*TP*GP*TP*TP*CP*T)-3')GR DNA-binding domain:Sgk 16bp complex-44X-ray diffraction1.612009-04-21
1293GPU|1|B+ 3GPU|1|CDNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*(8OG)P*AP*GP*TP*CP*TP*AP*CP*C)-3')MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC4-loop deletion complexX-ray diffraction1.622009-11-10
1303FYL|1|C+ 3FYL|1|DDNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*TP*TP*GP*TP*CP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*GP*AP*CP*AP*AP*AP*AP*TP*GP*TP*TP*CP*T)-3')GR DNA binding domain:CGT complexX-ray diffraction1.632009-04-21
1313G9O|1|C+ 3G9O|1|DDNA (5'-D(*TP*CP*GP*GP*AP*CP*AP*AP*AP*AP*TP*GP*TP*TP*CP*T)-3'), DNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*TP*TP*GP*TP*CP*CP*G)-3')GR DNA-binding domain:Sgk 16bp complex-9X-ray diffraction1.652009-04-21
1323G9P|1|C+ 3G9P|1|DDNA (5'-D(*TP*CP*GP*GP*AP*CP*AP*AP*AP*AP*TP*GP*TP*TP*CP*T)-3'), DNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*TP*TP*GP*TP*CP*CP*G)-3')GR DNA binding domain:Sgk 16bp complex-7X-ray diffraction1.6522009-04-14
1333GQ4|1|B+ 3GQ4|1|CDNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*GP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3')Sequence-matched MutM Lesion Recognition Complex 5 (LRC5)X-ray diffraction1.72009-11-10
1341D2I|1|C+ 1D2I|1|DDNA (5'-D(*TP*AP*TP*TP*AP*TP*AP*GP*AP*TP*CP*TP*AP*TP*AP*A)-3')CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE BGLII COMPLEXED WITH DNA 16-MERX-ray diffraction1.72000-02-21
1353JR5|1|B+ 3JR5|1|CDNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*(OGX)P*AP*GP*TP*CP*TP*AP*CP*C)-3')MutM lesion recognition control complex with N174C crosslinking siteX-ray diffraction1.7042009-11-03
1363GPX|1|B+ 3GPX|1|CDNA (5'-D(*A*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*GP*AP*GP*TP*CP*TP*AP*CP*C)-3')Sequence-matched MutM Interrogation Complex 4 (IC4)X-ray diffraction1.782009-11-10
1371GU4|1|C+ 1GU4|1|D5'-D(*TP*AP*GP*GP*AP*TP*TP*GP*CP*GP* CP*AP*AP*TP*AP*T)-3', 5'-D(*AP*AP*TP*AP*TP*TP*GP*CP*GP*CP* AP*AP*TP*CP*CP*T)-3'synthetic constructCrystal structure of C/EBPBETA BZIP homodimer bound to a high affinity DNA fragmentX-ray diffraction1.82003-06-26
1383G99|1|C+ 3G99|1|DDNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*TP*TP*GP*TP*TP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*AP*AP*CP*AP*AP*AP*AP*TP*GP*TP*TP*CP*T)-3')GR DNA binding domain:Pal complex-9X-ray diffraction1.812009-04-21
1393GQ3|1|B+ 3GQ3|1|CDNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*GP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3')MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC5-loop deletion complexX-ray diffraction1.832009-11-10
1403GPY|1|B+ 3GPY|1|CDNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*T*GP*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*CP*C)-3')Sequence-matched MutM Lesion Recognition Complex 3 (LRC3)X-ray diffraction1.852009-11-10
1413G9I|1|C+ 3G9I|1|DDNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*TP*TP*GP*TP*TP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*AP*AP*CP*AP*AP*AP*AP*TP*GP*TP*TP*CP*T)-3')GR DNA Binding domain: Pal complex-35X-ray diffraction1.852009-04-21
1421GTW|1|C+ 1GTW|1|D5'-D(*AP*AP*TP*GP*TP*GP*GP*CP*GP*CP* AP*AP*TP*CP*CP*T)-3', 5'-D(*TP*AP*GP*GP*AP*TP*TP*GP*CP*GP* CP*CP*AP*CP*AP*T)-3'crystal structure of C/EBPbeta bZip homodimer bound to a DNA fragment from the tom-1A promoterX-ray diffraction1.852004-02-06
1433GO8|1|B+ 3GO8|1|C5'-D(P*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*G)-3', 5'-D(*GP*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*C)-3'synthetic constructMutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC3-loop deletion complexX-ray diffraction1.892009-12-15
1443GQ5|1|B+ 3GQ5|1|CDNA (5'-D(*A*GP*GP*TP*AP*GP*AP*CP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*T*CP*CP*GP*GP*GP*TP*CP*TP*AP*CP*C)-3')Sequence-matched MutM Interrogation Complex 5 (IC5)X-ray diffraction1.92009-11-10
1453G8U|1|C+ 3G8U|1|DDNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*GP*GP*GP*TP*TP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*AP*AP*CP*CP*CP*AP*AP*TP*GP*TP*TP*CP*T)-3')DNA binding domain:GilZ 16bp complex-5X-ray diffraction1.92009-04-21
1463G6U|1|C+ 3G6U|1|DDNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*CP*CP*CP*TP*GP*TP*TP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*AP*AP*CP*AP*GP*GP*GP*TP*GP*TP*TP*CP*T)-3')GR DNA-binding domain:FKBP5 16bp complex-49X-ray diffraction1.92009-04-21
1473OJS|1|C+ 3OJS|1|BDNA (5'-D(*AP*AP*AP*AP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3')Snapshots of the large fragment of DNA polymerase I from Thermus Aquaticus processing C5 modified thymidinesX-ray diffraction1.92010-12-15
1483G6T|1|C+ 3G6T|1|DDNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*GP*GP*GP*TP*GP*TP*TP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*AP*AP*CP*AP*CP*CP*CP*TP*GP*TP*TP*CP*T)-3')GR gamma DNA-binding domain:FKBP5 16bp complex-34X-ray diffraction1.92009-04-21
1491G2F|1|A+ 1G2F|1|B+ 1G2F|1|D+ 1G2F|1|E5'-D(*GP*AP*CP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*AP*G)-3', 5'-D(*TP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*GP*TP*CP*C)-3'STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (TATAZF;CLONE #6)X-ray diffraction22001-09-07
1503OJU|1|C+ 3OJU|1|BDNA (5'-D(*AP*AP*AP*AP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3')Snapshot of the large fragment of DNA polymerase I from Thermus Aquaticus processing c5 modified thymidiesX-ray diffraction22010-12-15
1513GP1|1|B+ 3GP1|1|C5'-D(*AP*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*GP*CP**C)-3', 5'-D(P*TP*GP*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*CP*C)-3'MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC3-V222P complexX-ray diffraction2.052009-11-10
1523G8X|1|C+ 3G8X|1|DDNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*GP*GP*GP*TP*TP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*AP*AP*CP*CP*CP*AP*AP*TP*GP*TP*TP*CP*T)-3')GR DNA binding domain:GilZ 16bp complex-65X-ray diffraction2.052009-04-21
1533G97|1|C+ 3G97|1|DDNA (5'-D(*TP*GP*GP*AP*AP*CP*CP*CP*AP*AP*TP*GP*TP*TP*CP*T)-3'), DNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*GP*GP*GP*TP*TP*CP*C)-3')GR DNA-binding domain:GilZ 16bp complex-9X-ray diffraction2.082009-04-21
1541PUE|1|A+ 1PUE|1|BDNA (5'-D(*AP*AP*AP*AP*AP*GP*GP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*CP*CP*TP*TP*TP*T)-3')synthetic constructPU.1 ETS DOMAIN-DNA COMPLEXX-ray diffraction2.11997-02-12
1551GU5|1|C+ 1GU5|1|D5'-D(*TP*TP*GP*TP*GP*TP*TP*GP*GP*CP* CP*AP*AP*TP*CP*A)-3', 5'-D(*AP*TP*GP*AP*TP*TP*GP*GP*CP*CP* AP*AP*CP*AP*CP*A)-3'synthetic constructCrystal structure of C/EBPBETA BZIP homodimer bound to a DNA fragment from the MIM-1 promoterX-ray diffraction2.12003-06-26
1561PUE|1|C+ 1PUE|1|DDNA (5'-D(*AP*AP*AP*AP*AP*GP*GP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*CP*CP*TP*TP*TP*T)-3')synthetic constructPU.1 ETS DOMAIN-DNA COMPLEXX-ray diffraction2.11997-02-12
1571BY4|1|E+ 1BY4|1|FDNA (5'-D(*C*TP*AP*GP*GP*TP*CP*AP*AP*AP*GP*GP*TP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*TP*TP*GP*AP*CP*CP*TP*A)-3')STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNAX-ray diffraction2.12000-01-12
1581BY4|1|G+ 1BY4|1|HDNA (5'-D(*C*TP*AP*GP*GP*TP*CP*AP*AP*AP*GP*GP*TP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*TP*TP*GP*AP*CP*CP*TP*A)-3')STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNAX-ray diffraction2.12000-01-12
1592I9G|1|T+ 2I9G|1|P+ 2I9G|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'DNA Polymerase Beta with a Benzo[c]phenanthrene diol epoxide adducted guanine baseX-ray diffraction2.12006-10-24
1602ISO|1|T+ 2ISO|1|P+ 2ISO|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Ternary complex of DNA Polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-difluoromethylene triphosphateX-ray diffraction2.12007-01-30
1613GPP|1|B+ 3GPP|1|CDNA (5'-D(P*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*C)-3'), DNA (5'-D(P*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*C)-3')MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC3-T224P complexX-ray diffraction2.152009-11-10
1621G2D|1|A+ 1G2D|1|B+ 1G2D|1|D+ 1G2D|1|E5'-D(*GP*AP*CP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*AP*G)-3', 5'-D(*TP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*GP*TP*CP*C)-3'STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (CLONE #2)X-ray diffraction2.22001-09-07
1631IG7|1|C+ 1IG7|1|B5'-D(P*TP*CP*CP*TP*TP*CP*AP*AP*TP*TP*AP*GP*TP*GP*AP*C)-3', 5'-D(*CP*AP*CP*TP*AP*AP*TP*TP*GP*AP*AP*GP*G)-3'Msx-1 Homeodomain/DNA Complex StructureX-ray diffraction2.22001-04-23
1642ISP|1|T+ 2ISP|1|P+ 2ISP|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Ternary complex of DNA Polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-methylene triphosphateX-ray diffraction2.22007-01-30
1651BPY|1|T+ 1BPY|1|P+ 1BPY|1|DDNA (5'-D(*GP*TP*CP*GP*G)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*DOC)-3'), DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')synthetic constructHUMAN DNA POLYMERASE BETA COMPLEXED WITH GAPPED DNA AND DDCTPX-ray diffraction2.21997-06-16
1663G6Q|1|C+ 3G6Q|1|DDNA (5'-D(*TP*AP*GP*AP*AP*CP*AP*GP*GP*GP*TP*GP*TP*TP*CP*T)-3'), DNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*CP*CP*CP*TP*GP*TP*TP*CP*T)-3')GR DNA binding domain:FKBP5 binding site complex-9X-ray diffraction2.262009-04-21
1671TRR|1|C+ 1TRR|1|IDNA (5'-D(*AP*GP*CP*GP*TP*AP*CP*TP*AP*GP*TP*AP*CP*GP*CP*T)-3')TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEXX-ray diffraction2.41993-10-21
1681TRR|1|F+ 1TRR|1|LDNA (5'-D(*AP*GP*CP*GP*TP*AP*CP*TP*AP*GP*TP*AP*CP*GP*CP*T)-3')TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEXX-ray diffraction2.41993-10-21
1691BPX|1|T+ 1BPX|1|P+ 1BPX|1|DDNA (5'-D(*GP*TP*CP*GP*G)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')DNA POLYMERASE BETA/DNA COMPLEXX-ray diffraction2.41997-06-16
1702P66|1|B+ 2P66|1|C+ 2P66|1|DDNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3'), DNA (5'-D(P*(3DR)P*GP*TP*CP*GP*G)-3')Human DNA Polymerase beta complexed with tetrahydrofuran (abasic site) containing DNAX-ray diffraction2.52007-04-10
1711CKT|1|B+ 1CKT|1|CDNA (5'-D(*CP*CP*(5IU)P*CP*TP*CP*TP*GP*GP*AP*CP*CP*TP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*AP*GP*GP*TP*CP*CP*AP*GP*AP*GP*AP*GP*G)-3')CRYSTAL STRUCTURE OF HMG1 DOMAIN A BOUND TO A CISPLATIN-MODIFIED DNA DUPLEXX-ray diffraction2.51999-06-30
1721CF7|1|C+ 1CF7|1|DDNA (5'-D(*AP*TP*TP*TP*TP*CP*GP*CP*GP*CP*GP*GP*TP*TP*TP*T)-3'), DNA (5'-D(*TP*AP*AP*AP*AP*CP*CP*GP*CP*GP*CP*GP*AP*AP*AP*A)-3')STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DPX-ray diffraction2.61999-04-02
1731BPZ|1|T+ 1BPZ|1|P+ 1BPZ|1|DDNA (5'-D(*GP*TP*CP*GP*G)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*G)-3'), DNA (5'-D(*CP*CP*GP*AP*CP*CP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNAX-ray diffraction2.61997-06-16
1743JR4|1|B+ 3JR4|1|CDNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*G*CP*GP*TP*CP*CP*AP*(GX1)P*GP*TP*CP*TP*AP*CP*C)-3')MutM interrogating an extrahelical GX-ray diffraction2.6012009-11-03
1751HJC|1|B+ 1HJC|1|CDNA (5'-(*GP*AP*AP*CP*TP*CP*TP*GP*TP*GP*GP* TP*TP*GP*CP*G)-3'), DNA (5'-(CP*CP*GP*CP*AP*AP*CP*CP*AP*CP*AP* GP*AP*GP*TP*T)-3')Homo sapiensCRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTERX-ray diffraction2.652001-03-09
1761HJC|1|E+ 1HJC|1|FDNA (5'-(*GP*AP*AP*CP*TP*CP*TP*GP*TP*GP*GP* TP*TP*GP*CP*G)-3'), DNA (5'-(CP*CP*GP*CP*AP*AP*CP*CP*AP*CP*AP* GP*AP*GP*TP*T)-3')Homo sapiensCRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTERX-ray diffraction2.652001-03-09
1771ECR|1|B+ 1ECR|1|CDNA (5'-D(*TP*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*CP*T)-3, DNA (5'-D(*TP*AP*GP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH DNAX-ray diffraction2.71997-09-05
1781MQ3|1|T+ 1MQ3|1|P+ 1MQ3|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine Template Paired with dCTPX-ray diffraction2.82003-01-28
1791YFL|1|F+ 1YFL|1|G5'-D(P*TP*CP*AP*CP*AP*GP*GP*AP*TP*CP*CP*TP*GP*TP*GP*A)-3'T4Dam in Complex with Sinefungin and 16-mer Oligonucleotide Showing Semi-specific and Specific Contact and Flipped BaseX-ray diffraction3.092005-05-17
1801YFL|1|H+ 1YFL|1|I5'-D(P*TP*CP*AP*CP*AP*GP*GP*AP*TP*CP*CP*TP*GP*TP*GP*A)-3'T4Dam in Complex with Sinefungin and 16-mer Oligonucleotide Showing Semi-specific and Specific Contact and Flipped BaseX-ray diffraction3.092005-05-17
1811MQ2|1|T+ 1MQ2|1|P+ 1MQ2|1|D5'-D(P*GP*TP*CP*GP*G)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(2DA))-3', 5'-D(*CP*CP*GP*AP*CP*(8OG)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine and dAMPX-ray diffraction3.12003-01-28
1821SSV|1|A+ 1SSV|1|B5'-D(*CP*GP*AP*GP*GP*TP*TP*TP*AP*AP*AP*CP*CP*TP*CP*G)-3'Compensating bends in a 16 base-pair DNA oligomer containing a T3A3 segmentSolution NMR2004-12-07
1831SS7|1|A+ 1SS7|1|B5'-D(*CP*GP*AP*GP*GP*TP*TP*TP*AP*AP*AP*CP*CP*TP*CP*G)-3'Compensating bends in a 16 base-pair DNA oligomer containing a T3A3 segmentSolution NMR2004-12-07
1842KMK|1|B+ 2KMK|1|CDNA (5'-D(*CP*AP*TP*AP*AP*AP*TP*CP*AP*CP*TP*GP*CP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*GP*CP*AP*GP*TP*GP*AP*TP*TP*TP*AP*TP*G)-3')Gfi-1 Zinc Fingers 3-5 complexed with DNASolution NMR2010-03-02
1852Z33|1|B+ 2Z33|1|C5'-D(*AP*CP*TP*GP*TP*CP*AP*TP*AP*AP*AP*TP*CP*TP*GP*T)-3', 5'-D(*AP*CP*AP*GP*AP*TP*TP*TP*AP*TP*GP*AP*CP*AP*GP*T)-3'Solution structure of the DNA complex of PhoB DNA-binding/transactivation DomainSolution NMR2008-04-22
1862KDZ|1|B+ 2KDZ|1|C5'-D(*AP*AP*GP*AP*TP*AP*AP*CP*GP*AP*TP*AP*TP*TP*TP*A)-3', 5'-D(*TP*AP*AP*AP*TP*AP*TP*CP*GP*TP*TP*AP*TP*CP*TP*T)-3'Structure of the R2R3 DNA binding domain of MYB1 protein from protozoan parasite trichomonas vaginalis in complex with MRE-1/MRE-2R DNASolution NMR2009-03-17

Release history

Release0.12
Date2011-04-11

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
1
1L2B|1|B+1L2B|1|C+1L2B|1|D		MutM (Fpg) DNA End-Product StructureX-RAY DIFFRACTION2.416enzyme,hydrolase
2
3COA|1|D+3COA|1|E		Crystal Structure of FoxO1 DBD Bound to IRE DNAX-RAY DIFFRACTION2.216B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
3
3JTG|1|B+3JTG|1|C		Crystal structure of mouse Elf3 C-terminal DNA-binding domain in complex with type II TGF-beta receptor promoter DNAX-RAY DIFFRACTION2.216B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
4
3OQM|1|B+3OQM|1|E		structure of ccpa-hpr-ser46p-ackA2 complexX-RAY DIFFRACTION2.9616B-form double helix,double helix,structureDNA-binding transcription factor (TF),enzyme,helix-turn-helix (HTH),kinase,lambda repressor-like,regulatory,transcription,transferase
5
3GP1|1|B+3GP1|1|C		MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC3-V222P complexX-RAY DIFFRACTION2.0516B-form double helix,double helix,structureenzyme,hydrolase
6
2NTZ|1|W+2NTZ|1|Y		Structure of a ParB-DNA complex reveals a double B-box interactionX-RAY DIFFRACTION3.3516centromere,chromatin,structural
7
3JR4|1|B+3JR4|1|C		MutM interrogating an extrahelical GX-RAY DIFFRACTION2.60116double helix,structureenzyme,hydrolase
8
3GPX|1|B+3GPX|1|C		Sequence-matched MutM Interrogation Complex 4 (IC4)X-RAY DIFFRACTION1.7816B-form double helix,double helix,structureenzyme,hydrolase
9
2KMK|1|B+2KMK|1|C		Gfi-1 Zinc Fingers 3-5 complexed with DNASOLUTION NMR16double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
10
3N7B|1|D+3N7B|1|C		SgrAI bound to secondary site DNA and Ca(II)X-RAY DIFFRACTION2.6516B-form double helix,double helix,structureenzyme,hydrolase,nuclease
11
2C6Y|1|C+2C6Y|1|D		Crystal structure of interleukin enhancer-binding factor 1 bound to DNAX-RAY DIFFRACTION2.416B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
12
2QL2|1|G+2QL2|1|H		Crystal Structure of the basic-helix-loop-helix domains of the heterodimer E47/NeuroD1 bound to DNAX-RAY DIFFRACTION2.516B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,helix-loop-helix (bHLH),regulatory,transcription
13
2RDJ|1|D+2RDJ|1|C		Snapshots of a Y-family DNA polymerase in replication: Dpo4 in apo and binary/ternary complex formsX-RAY DIFFRACTION2.216B-form double helix,double helix,structureenzyme,polymerase,transferase
14
3GQC|1|L+3GQC|1|K		Structure of human Rev1-DNA-dNTP ternary complexX-RAY DIFFRACTION2.516B-form double helix,double helix,structureDNA replication/repair,enzyme,polymerase,regulatory,transferase
15
1S0M|1|F+1S0M|1|E		Crystal structure of a Benzo[a]pyrene Diol Epoxide adduct in a ternary complex with a DNA polymeraseX-RAY DIFFRACTION2.716B-form double helix,double helix,structureenzyme,polymerase,transferase
16
3N78|1|D+3N78|1|C		SgrAI bound to Secondary Site DNA and Mg(II)X-RAY DIFFRACTION2.9516double helix,structureenzyme,hydrolase,nuclease
17
1LQ1|1|E+1LQ1|1|F		DNA Complexed Structure of the Key Transcription Factor Initiating Development in Sporulation BacteriaX-RAY DIFFRACTION2.316B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
18
3CO7|1|D+3CO7|1|E		Crystal Structure of FoxO1 DBD Bound to DBE2 DNAX-RAY DIFFRACTION2.9116B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
19
2QL2|1|E+2QL2|1|F		Crystal Structure of the basic-helix-loop-helix domains of the heterodimer E47/NeuroD1 bound to DNAX-RAY DIFFRACTION2.516B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,helix-loop-helix (bHLH),regulatory,transcription
20
3IGC|1|D+3IGC|1|B+3IGC|1|C		Smallpox virus topoisomerase-DNA transition stateX-RAY DIFFRACTION2.116B-form double helix,double helix,structureenzyme,isomerase
21
3C2L|1|T+3C2L|1|P+3C2L|1|D		Ternary complex of DNA POLYMERASE BETA with a C:DAPCPP mismatch in the active siteX-RAY DIFFRACTION2.616enzyme,polymerase,transferase
22
1RZR|1|B+1RZR|1|E		crystal structure of transcriptional regulator-phosphoprotein-DNA complexX-RAY DIFFRACTION2.816double helix,structureDNA-binding transcription factor (TF),enzyme,helix-turn-helix (HTH),kinase,lambda repressor-like,regulatory,transcription,transferase
23
2I06|1|B+2I06|1|C		Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- Locked formX-RAY DIFFRACTION2.216double helix,structureDNA replication/repair,regulatory
24
3F27|1|A+3F27|1|B		Structure of Sox17 Bound to DNAX-RAY DIFFRACTION2.7516B-form double helix,double helix,structureDNA-binding transcription factor (TF),HMG box,other α-helix,regulatory,transcription
25
1JXL|1|T+1JXL|1|P		Crystal Structure of a Y-Family DNA Polymerase in a Ternary Complex with DNA Substrates and an Incoming NucleotideX-RAY DIFFRACTION2.116B-form double helix,double helix,structureenzyme,polymerase,transferase
26
1CIT|1|B+1CIT|1|C		DNA-BINDING MECHANISM OF THE MONOMERIC ORPHAN NUCLEAR RECEPTOR NGFI-BX-RAY DIFFRACTION2.716double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
27
1S0M|1|D+1S0M|1|C		Crystal structure of a Benzo[a]pyrene Diol Epoxide adduct in a ternary complex with a DNA polymeraseX-RAY DIFFRACTION2.716B-form double helix,double helix,structureenzyme,polymerase,transferase
28
3CO7|1|A+3CO7|1|B		Crystal Structure of FoxO1 DBD Bound to DBE2 DNAX-RAY DIFFRACTION2.9116B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
29
1G2F|1|A+1G2F|1|B+1G2F|1|D+1G2F|1|E		STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (TATAZF;CLONE #6)X-RAY DIFFRACTION216B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
30
3GQC|1|J+3GQC|1|I		Structure of human Rev1-DNA-dNTP ternary complexX-RAY DIFFRACTION2.516B-form double helix,double helix,structureDNA replication/repair,enzyme,polymerase,regulatory,transferase
31
1RYR|1|C+1RYR|1|B		REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTIONX-RAY DIFFRACTION2.2816B-form double helix,double helix,structureenzyme,polymerase,transferase
32
1LQ1|1|G+1LQ1|1|H		DNA Complexed Structure of the Key Transcription Factor Initiating Development in Sporulation BacteriaX-RAY DIFFRACTION2.316B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
33
1PUE|1|C+1PUE|1|D		PU.1 ETS DOMAIN-DNA COMPLEXX-RAY DIFFRACTION2.116B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
34
2FVS|1|B		A Structural Study of the CA Dinucleotide Step in the Integrase Processing Site of Moloney Murine Leukemia VirusX-RAY DIFFRACTION2.3516B-form double helix,double helix,structureenzyme,polymerase,transferase
35
3GPP|1|B+3GPP|1|C		MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC3-T224P complexX-RAY DIFFRACTION2.1516B-form double helix,double helix,structureenzyme,hydrolase
36
3JR5|1|B+3JR5|1|C		MutM lesion recognition control complex with N174C crosslinking siteX-RAY DIFFRACTION1.70416B-form double helix,double helix,structureenzyme,hydrolase
37
2KDZ|1|B+2KDZ|1|C		Structure of the R2R3 DNA binding domain of MYB1 protein from protozoan parasite trichomonas vaginalis in complex with MRE-1/MRE-2R DNASOLUTION NMR16double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription
38
3GQC|1|H+3GQC|1|G		Structure of human Rev1-DNA-dNTP ternary complexX-RAY DIFFRACTION2.516B-form double helix,double helix,structureDNA replication/repair,enzyme,polymerase,regulatory,transferase
39
1SS7|1|A+1SS7|1|B		Compensating bends in a 16 base-pair DNA oligomer containing a T3A3 segmentSOLUTION NMR16double helix,structure
40
3OA6|1|E+3OA6|1|F		Human MSL3 Chromodomain bound to DNA and H4K20me1 peptideX-RAY DIFFRACTION2.3516chromatin,structural
41
1TV9|1|T+1TV9|1|P+1TV9|1|D		HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE ADENINE AND INCOMING CYTIDINEX-RAY DIFFRACTION216enzyme,polymerase,transferase
42
2P66|1|B+2P66|1|C+2P66|1|D		Human DNA Polymerase beta complexed with tetrahydrofuran (abasic site) containing DNAX-RAY DIFFRACTION2.516enzyme,polymerase,transferase
43
3LK9|1|T+3LK9|1|P+3LK9|1|D		DNA polymerase beta with a gapped DNA substrate and dTMP(CF2)P(CF2)PX-RAY DIFFRACTION2.516enzyme,polymerase,transferase
44
3GDX|1|T+3GDX|1|P+3GDX|1|D		Dna polymerase beta with a gapped DND substrate and dTMP(CF2)PPX-RAY DIFFRACTION2.216enzyme,polymerase,transferase
45
2FMS|1|T+2FMS|1|P+2FMS|1|D		DNA Polymerase beta with a gapped DNA substrate and dUMPNPP with magnesium in the catalytic siteX-RAY DIFFRACTION216enzyme,polymerase,transferase
46
3C2K|1|T+3C2K|1|P+3C2K|1|D		DNA POLYMERASE BETA with a gapped DNA substrate and DUMPNPP with Manganese in the active siteX-RAY DIFFRACTION2.416enzyme,polymerase,transferase
47
2FMQ|1|B+2FMQ|1|C+2FMQ|1|D		Sodium in active site of DNA Polymerase BetaX-RAY DIFFRACTION2.216enzyme,polymerase,transferase
48
3MBY|1|T+3MBY|1|P+3MBY|1|D		Ternary complex of DNA Polymerase BETA with template base A and 8oxodGTP in the active site with a dideoxy terminated primerX-RAY DIFFRACTION216enzyme,polymerase,transferase
49
1XSD|1|B		Crystal structure of the BlaI repressor in complex with DNAX-RAY DIFFRACTION2.716double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
50
1MQ2|1|T+1MQ2|1|P+1MQ2|1|D		Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine and dAMPX-RAY DIFFRACTION3.116enzyme,polymerase,transferase
51
3G9M|1|C+3G9M|1|D		GR DNA-binding domain:Sgk 16bp complex-44X-RAY DIFFRACTION1.6116B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
52
1YFL|1|F+1YFL|1|G		T4Dam in Complex with Sinefungin and 16-mer Oligonucleotide Showing Semi-specific and Specific Contact and Flipped BaseX-RAY DIFFRACTION3.0916enzyme,methylase,transferase
53
3GPU|1|B+3GPU|1|C		MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC4-loop deletion complexX-RAY DIFFRACTION1.6216B-form double helix,double helix,structureenzyme,hydrolase
54
1YFL|1|H+1YFL|1|I		T4Dam in Complex with Sinefungin and 16-mer Oligonucleotide Showing Semi-specific and Specific Contact and Flipped BaseX-RAY DIFFRACTION3.0916enzyme,methylase,transferase
55
3G9I|1|C+3G9I|1|D		GR DNA Binding domain: Pal complex-35X-RAY DIFFRACTION1.8516B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
56
1PUE|1|A+1PUE|1|B		PU.1 ETS DOMAIN-DNA COMPLEXX-RAY DIFFRACTION2.116B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
57
2D45|1|G+2D45|1|H		Crystal structure of the MecI-mecA repressor-operator complexX-RAY DIFFRACTION3.816DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
58
2ISP|1|T+2ISP|1|P+2ISP|1|D		Ternary complex of DNA Polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-methylene triphosphateX-RAY DIFFRACTION2.216enzyme,polymerase,transferase
59
3G9P|1|C+3G9P|1|D		GR DNA binding domain:Sgk 16bp complex-7X-RAY DIFFRACTION1.65216B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
60
3G8U|1|C+3G8U|1|D		DNA binding domain:GilZ 16bp complex-5X-RAY DIFFRACTION1.916B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
61
2Z33|1|B+2Z33|1|C		Solution structure of the DNA complex of PhoB DNA-binding/transactivation DomainSOLUTION NMR16B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
62
1YFH|1|D+1YFH|1|E		wt Human O6-Alkylguanine-DNA Alkyltransferase Bound To DNA Containing an Alkylated CytosineX-RAY DIFFRACTION3.0116B-form double helix,double helix,structureenzyme,methylase,transferase
63
1GU5|1|C+1GU5|1|D		Crystal structure of C/EBPBETA BZIP homodimer bound to a DNA fragment from the MIM-1 promoterX-RAY DIFFRACTION2.116B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,leucine zipper (bZIP),regulatory,transcription
64
3MFK|1|C+3MFK|1|D		Ets1 complex with stromelysin-1 promoter DNAX-RAY DIFFRACTION316B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
65
1BY4|1|E+1BY4|1|F		STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNAX-RAY DIFFRACTION2.116double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
66
1D2I|1|C+1D2I|1|D		CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE BGLII COMPLEXED WITH DNA 16-MERX-RAY DIFFRACTION1.716B-form double helix,double helix,structureenzyme,hydrolase,nuclease
67
1MQ3|1|T+1MQ3|1|P+1MQ3|1|D		Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine Template Paired with dCTPX-RAY DIFFRACTION2.816enzyme,polymerase,transferase
68
3OQN|1|B+3OQN|1|E		Structure of ccpa-hpr-ser46-p-gntr-down creX-RAY DIFFRACTION3.316B-form double helix,double helix,structureDNA-binding transcription factor (TF),enzyme,helix-turn-helix (HTH),kinase,lambda repressor-like,regulatory,transcription,transferase
69
3OJU|1|C+3OJU|1|B		Snapshot of the large fragment of DNA polymerase I from Thermus Aquaticus processing c5 modified thymidiesX-RAY DIFFRACTION216double helix,structureenzyme,polymerase,transferase
70
2QNF|1|C+2QNF|1|D		Crystal structure of T4 Endonuclease VII H43N mutant in complex with heteroduplex DNA containing base mismatchesX-RAY DIFFRACTION316enzyme,hydrolase,nuclease
71
3G6U|1|C+3G6U|1|D		GR DNA-binding domain:FKBP5 16bp complex-49X-RAY DIFFRACTION1.916B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
72
1DP7|1|D		COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITEX-RAY DIFFRACTION1.516B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
73
1BY4|1|G+1BY4|1|H		STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNAX-RAY DIFFRACTION2.116double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
74
3GQ5|1|B+3GQ5|1|C		Sequence-matched MutM Interrogation Complex 5 (IC5)X-RAY DIFFRACTION1.916double helix,structureenzyme,hydrolase
75
1HJC|1|B+1HJC|1|C		CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTERX-RAY DIFFRACTION2.6516B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,runt,transcription
76
3G99|1|C+3G99|1|D		GR DNA binding domain:Pal complex-9X-RAY DIFFRACTION1.8116B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
77
3G97|1|C+3G97|1|D		GR DNA-binding domain:GilZ 16bp complex-9X-RAY DIFFRACTION2.0816B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
78
2NTZ|1|E+2NTZ|1|U		Structure of a ParB-DNA complex reveals a double B-box interactionX-RAY DIFFRACTION3.3516centromere,chromatin,structural
79
1TRR|1|C+1TRR|1|I		TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEXX-RAY DIFFRACTION2.416B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,trp repressor
80
1GU4|1|C+1GU4|1|D		Crystal structure of C/EBPBETA BZIP homodimer bound to a high affinity DNA fragmentX-RAY DIFFRACTION1.816B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,leucine zipper (bZIP),regulatory,transcription
81
3G8X|1|C+3G8X|1|D		GR DNA binding domain:GilZ 16bp complex-65X-RAY DIFFRACTION2.0516B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
82
2D45|1|E+2D45|1|F		Crystal structure of the MecI-mecA repressor-operator complexX-RAY DIFFRACTION3.816DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
83
1TRR|1|F+1TRR|1|L		TANDEM BINDING IN CRYSTALS OF A TRP REPRESSOR/OPERATOR HALF-SITE COMPLEXX-RAY DIFFRACTION2.416B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,trp repressor
84
1YFH|1|F+1YFH|1|G		wt Human O6-Alkylguanine-DNA Alkyltransferase Bound To DNA Containing an Alkylated CytosineX-RAY DIFFRACTION3.0116B-form double helix,double helix,structureenzyme,methylase,transferase
85
1BPZ|1|T+1BPZ|1|P+1BPZ|1|D		HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNAX-RAY DIFFRACTION2.616enzyme,polymerase,transferase
86
3GQ4|1|B+3GQ4|1|C		Sequence-matched MutM Lesion Recognition Complex 5 (LRC5)X-RAY DIFFRACTION1.716B-form double helix,double helix,structureenzyme,hydrolase
87
1SSV|1|A+1SSV|1|B		Compensating bends in a 16 base-pair DNA oligomer containing a T3A3 segmentSOLUTION NMR16double helix,structure
88
1ZVV|1|T		Crystal structure of a ccpa-crh-dna complexX-RAY DIFFRACTION2.9816B-form double helix,double helix,structureDNA-binding transcription factor (TF),enzyme,helix-turn-helix (HTH),kinase,lambda repressor-like,regulatory,transcription,transferase
89
1ECR|1|B+1ECR|1|C		ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH DNAX-RAY DIFFRACTION2.716double helix,structureDNA replication/repair,regulatory
90
1ZVV|1|O		Crystal structure of a ccpa-crh-dna complexX-RAY DIFFRACTION2.9816B-form double helix,double helix,structureDNA-binding transcription factor (TF),enzyme,helix-turn-helix (HTH),kinase,lambda repressor-like,regulatory,transcription,transferase
91
2ISO|1|T+2ISO|1|P+2ISO|1|D		Ternary complex of DNA Polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-difluoromethylene triphosphateX-RAY DIFFRACTION2.116enzyme,polymerase,transferase
92
3GQ3|1|B+3GQ3|1|C		MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC5-loop deletion complexX-RAY DIFFRACTION1.8316B-form double helix,double helix,structureenzyme,hydrolase
93
1G2D|1|A+1G2D|1|B+1G2D|1|D+1G2D|1|E		STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (CLONE #2)X-RAY DIFFRACTION2.216B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
94
1DFM|1|C+1DFM|1|D		Crystal structure of restriction endonuclease BGLII complexed with DNA 16-merX-RAY DIFFRACTION1.516B-form double helix,double helix,structureenzyme,hydrolase,nuclease
95
3G6T|1|C+3G6T|1|D		GR gamma DNA-binding domain:FKBP5 16bp complex-34X-RAY DIFFRACTION1.916B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
96
3GPY|1|B+3GPY|1|C		Sequence-matched MutM Lesion Recognition Complex 3 (LRC3)X-RAY DIFFRACTION1.8516B-form double helix,double helix,structureenzyme,hydrolase
97
2I9G|1|T+2I9G|1|P+2I9G|1|D		DNA Polymerase Beta with a Benzo[c]phenanthrene diol epoxide adducted guanine baseX-RAY DIFFRACTION2.116enzyme,polymerase,transferase
98
3GO8|1|B+3GO8|1|C		MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC3-loop deletion complexX-RAY DIFFRACTION1.8916B-form double helix,double helix,structureenzyme,hydrolase
99
3G6Q|1|C+3G6Q|1|D		GR DNA binding domain:FKBP5 binding site complex-9X-RAY DIFFRACTION2.2616B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
100
3FYL|1|C+3FYL|1|D		GR DNA binding domain:CGT complexX-RAY DIFFRACTION1.6316B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
101
1CF7|1|C+1CF7|1|D		STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DPX-RAY DIFFRACTION2.616B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription,winged helix/forkhead
102
3G9O|1|C+3G9O|1|D		GR DNA-binding domain:Sgk 16bp complex-9X-RAY DIFFRACTION1.6516B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
103
1BPX|1|T+1BPX|1|P+1BPX|1|D		DNA POLYMERASE BETA/DNA COMPLEXX-RAY DIFFRACTION2.416enzyme,polymerase,transferase
104
1ZVV|1|R		Crystal structure of a ccpa-crh-dna complexX-RAY DIFFRACTION2.9816B-form double helix,double helix,structureDNA-binding transcription factor (TF),enzyme,helix-turn-helix (HTH),kinase,lambda repressor-like,regulatory,transcription,transferase
105
1IG7|1|C+1IG7|1|B		Msx-1 Homeodomain/DNA Complex StructureX-RAY DIFFRACTION2.216B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription
106
2QNF|1|E+2QNF|1|F		Crystal structure of T4 Endonuclease VII H43N mutant in complex with heteroduplex DNA containing base mismatchesX-RAY DIFFRACTION316enzyme,hydrolase,nuclease
107
1BPY|1|T+1BPY|1|P+1BPY|1|D		HUMAN DNA POLYMERASE BETA COMPLEXED WITH GAPPED DNA AND DDCTPX-RAY DIFFRACTION2.216enzyme,polymerase,transferase
108
2WTU|1|E+2WTU|1|F		Crystal structure of Escherichia coli MutS in complex with a 16 basepair oligo containing an A.A mismatch.X-RAY DIFFRACTION3.416B-form double helix,double helix,structureDNA replication/repair,regulatory
109
1CKT|1|B+1CKT|1|C		CRYSTAL STRUCTURE OF HMG1 DOMAIN A BOUND TO A CISPLATIN-MODIFIED DNA DUPLEXX-RAY DIFFRACTION2.516B-form double helix,double helix,structureDNA-binding transcription factor (TF),HMG box,other α-helix,regulatory,transcription
110
2I05|1|B+2I05|1|C		Escherichia Coli Replication Terminator Protein (Tus) Complexed With TerA DNAX-RAY DIFFRACTION2.616double helix,structureDNA replication/repair,regulatory
111
3OJS|1|C+3OJS|1|B		Snapshots of the large fragment of DNA polymerase I from Thermus Aquaticus processing C5 modified thymidinesX-RAY DIFFRACTION1.916double helix,structureenzyme,polymerase,transferase
112
1GTW|1|C+1GTW|1|D		crystal structure of C/EBPbeta bZip homodimer bound to a DNA fragment from the tom-1A promoterX-RAY DIFFRACTION1.8516B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,leucine zipper (bZIP),regulatory,transcription
113
1L3V|1|C+1L3V|1|B		Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 15 base pairs of duplex DNA following addition of dTTP, dATP, dCTP, and dGTP residues.X-RAY DIFFRACTION1.7116B-form double helix,double helix,structureenzyme,polymerase,transferase
114
1L5U|1|C+1L5U|1|B		Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 12 base pairs of duplex DNA following addition of a dTTP, a dATP, and a dCTP residue.X-RAY DIFFRACTION1.9516B-form double helix,double helix,structureenzyme,polymerase,transferase
115
1NJY|1|C+1NJY|1|B		THYMINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITEX-RAY DIFFRACTION216B-form double helix,double helix,feature,mispair,structureenzyme,polymerase,transferase
116
1L3U|1|C+1L3U|1|B		Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 11 base pairs of duplex DNA following addition of a dTTP and a dATP residue.X-RAY DIFFRACTION1.816B-form double helix,double helix,structureenzyme,polymerase,transferase
117
1L3T|1|C+1L3T|1|B		Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 10 base pairs of duplex DNA following addition of a single dTTP residueX-RAY DIFFRACTION1.716B-form double helix,double helix,structureenzyme,polymerase,transferase
118
1L3S|1|C+1L3S|1|B		Crystal Structure of Bacillus DNA Polymerase I Fragment complexed to 9 base pairs of duplex DNA.X-RAY DIFFRACTION1.716B-form double helix,double helix,structureenzyme,polymerase,transferase
119
3GQC|1|F+3GQC|1|E		Structure of human Rev1-DNA-dNTP ternary complexX-RAY DIFFRACTION2.516B-form double helix,double helix,structureDNA replication/repair,enzyme,polymerase,regulatory,transferase
120
1RZR|1|H+1RZR|1|R		crystal structure of transcriptional regulator-phosphoprotein-DNA complexX-RAY DIFFRACTION2.816double helix,structureDNA-binding transcription factor (TF),enzyme,helix-turn-helix (HTH),kinase,lambda repressor-like,regulatory,transcription,transferase
121
1TVA|1|T+1TVA|1|P+1TVA|1|D		HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE THYMIDINE AND INCOMING CYTIDINEX-RAY DIFFRACTION2.616enzyme,polymerase,transferase
122
1HJC|1|E+1HJC|1|F		CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTERX-RAY DIFFRACTION2.6516B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,runt,transcription
123
3OA6|1|C+3OA6|1|D		Human MSL3 Chromodomain bound to DNA and H4K20me1 peptideX-RAY DIFFRACTION2.3516chromatin,structural
124
2IVK|1|I+2IVK|1|J		Crystal structure of the periplasmic endonuclease Vvn complexed with a 16-bp DNAX-RAY DIFFRACTION2.916double helix,structureenzyme,hydrolase,nuclease
125
1NK4|1|C+1NK4|1|B		GUANINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITEX-RAY DIFFRACTION1.616enzyme,polymerase,transferase
126
2PXI|1|T+2PXI|1|P+2PXI|1|D		Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monofluoromethylene triphosphateX-RAY DIFFRACTION2.116enzyme,polymerase,transferase
127
2HHT|1|C+2HHT|1|B		C:O6-methyl-guanine pair in the polymerase-2 basepair positionX-RAY DIFFRACTION2.0516B-form double helix,double helix,structureenzyme,polymerase,transferase
128
2F5P|1|C+2F5P|1|D		MutM crosslinked to undamaged DNA sampling A:T base pair IC2X-RAY DIFFRACTION216B-form double helix,double helix,structureenzyme,hydrolase
129
1L1T|1|B+1L1T|1|C		MutM (Fpg) Bound to Abasic-Site Containing DNAX-RAY DIFFRACTION1.816double helix,structureenzyme,hydrolase
130
2FVQ|1|B		A Structural Study of the CA Dinucleotide Step in the Integrase Processing Site of Moloney Murine Leukemia VirusX-RAY DIFFRACTION2.316B-form double helix,double helix,structureenzyme,polymerase,transferase
131
2F5S|1|B+2F5S|1|C		Catalytically inactive (E3Q) MutM crosslinked to oxoG:C containing DNA CC1X-RAY DIFFRACTION2.3516B-form double helix,double helix,structureenzyme,hydrolase
132
2F5N|1|B+2F5N|1|C		MutM crosslinked to undamaged DNA sampling A:T base pair IC1X-RAY DIFFRACTION216B-form double helix,double helix,structureenzyme,hydrolase
133
1NKE|1|C+1NKE|1|B		A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A CYTOSINE-THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP.X-RAY DIFFRACTION1.816B-form double helix,double helix,structureenzyme,polymerase,transferase
134
3CO6|1|A+3CO6|1|B		Crystal Structure of FoxO1 DBD Bound to DBE1 DNAX-RAY DIFFRACTION2.116B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
135
3ISC|1|T+3ISC|1|P+3ISC|1|D		Binary complex of human DNA polymerase beta with an abasic site (THF) in the gapped DNAX-RAY DIFFRACTION216enzyme,polymerase,transferase
136
3JPO|1|T+3JPO|1|P+3JPO|1|D		Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monochloromethylene triphosphateX-RAY DIFFRACTION216enzyme,polymerase,transferase
137
3OHB|1|T+3OHB|1|P		Yeast DNA polymerase eta extending from an 8-oxoG lesionX-RAY DIFFRACTION216double helix,structureenzyme,polymerase,transferase
138
1ZJN|1|T+1ZJN|1|P+1ZJN|1|D		Human DNA Polymerase beta complexed with DNA containing an A-A mismatched primer terminus with dGTPX-RAY DIFFRACTION2.6116enzyme,polymerase,transferase
139
2F5Q|1|B+2F5Q|1|C		Catalytically inactive (E3Q) MutM crosslinked to oxoG:C containing DNA CC2X-RAY DIFFRACTION2.3516double helix,structureenzyme,hydrolase
140
3LAJ|1|K+3LAJ|1|L		The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-arginine.X-RAY DIFFRACTION2.30616DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
141
2AQ4|1|T+2AQ4|1|P		Ternary complex of the catalytic core of REV1 with DNA and dCTP.X-RAY DIFFRACTION2.3216B-form double helix,double helix,structureDNA replication/repair,enzyme,polymerase,regulatory,transferase
142
3LAP|1|K+3LAP|1|L		The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-canavanine.X-RAY DIFFRACTION2.1516DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
143
2FVP|1|B		A Structural Study of the CA Dinucleotide Step in the Integrase Processing Site of Moloney Murine Leukemia VirusX-RAY DIFFRACTION2.2516B-form double helix,double helix,structureenzyme,polymerase,transferase
144
3LWL|1|C+3LWL|1|B		Structure of Klenow fragment of Taq polymerase in complex with an abasic siteX-RAY DIFFRACTION2.2516B-form double helix,double helix,structureenzyme,polymerase,transferase
145
3ISB|1|T+3ISB|1|P+3ISB|1|D		Binary complex of human DNA polymerase beta with a gapped DNAX-RAY DIFFRACTION216enzyme,polymerase,transferase
146
2EWJ|1|B+2EWJ|1|C		Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- Locked formX-RAY DIFFRACTION2.716double helix,structureDNA replication/repair,regulatory
147
3BS1|1|B+3BS1|1|C		Structure of the Staphylococcus aureus AgrA LytTR Domain Bound to DNA Reveals a Beta Fold with a Novel Mode of BindingX-RAY DIFFRACTION1.616B-form double helix,double helix,structureregulatory,transcription
148
3JPT|1|T+3JPT|1|P+3JPT|1|D		Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-fluoro chloro methylene triphosphateX-RAY DIFFRACTION2.1516enzyme,polymerase,transferase
149
3M8S|1|C+3M8S|1|B		Crystal structure of the large fragment of DNA polymerase I from Thermus aquaticus in a closed ternary complex with trapped 4'-methylated dTTPX-RAY DIFFRACTION2.216double helix,structureenzyme,polymerase,transferase
150
2NOB|1|B+2NOB|1|C		Structure of catalytically inactive H270A human 8-oxoguanine glycosylase crosslinked to 8-oxoguanine DNAX-RAY DIFFRACTION2.116B-form double helix,double helix,structureenzyme,hydrolase
151
3JPR|1|T+3JPR|1|P+3JPR|1|D		Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-dimethyl methylene triphosphateX-RAY DIFFRACTION2.116enzyme,polymerase,transferase
152
2HW3|1|C+2HW3|1|B		T:O6-methyl-guanine pair in the polymerase postinsertion site (-1 basepair position)X-RAY DIFFRACTION1.9816B-form double helix,double helix,structureenzyme,polymerase,transferase
153
1NJZ|1|C+1NJZ|1|B		CYTOSINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITEX-RAY DIFFRACTION216B-form double helix,double helix,feature,mispair,structureenzyme,polymerase,transferase
154
1L2D|1|B+1L2D|1|C		MutM (Fpg)-DNA Estranged Guanine Mismatch Recognition ComplexX-RAY DIFFRACTION216double helix,structureenzyme,hydrolase
155
1NK5|1|C+1NK5|1|B		ADENINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITEX-RAY DIFFRACTION2.116B-form double helix,double helix,structureenzyme,polymerase,transferase
156
2VE9|1|K+2VE9|1|L		Xray structure of KOPS bound gamma domain of FtsK (P. aeruginosa)X-RAY DIFFRACTION1.916B-form double helix,double helix,structurecell cycle,regulatory
157
3C2M|1|T+3C2M|1|P+3C2M|1|D		Ternary complex of DNA POLYMERASE BETA with a G:dAPCPP mismatch in the active siteX-RAY DIFFRACTION2.1516enzyme,polymerase,transferase
158
2F5O|1|B+2F5O|1|C		MutM crosslinked to undamaged DNA sampling G:C base pair IC3X-RAY DIFFRACTION2.0516B-form double helix,double helix,structureenzyme,hydrolase
159
2FVR|1|B		A Structural Study of the CA Dinucleotide Step in the Integrase Processing Site of Moloney Murine Leukemia VirusX-RAY DIFFRACTION2.216B-form double helix,double helix,structureenzyme,polymerase,transferase
160
3JPS|1|T+3JPS|1|P+3JPS|1|D		Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-fluoro methyl methylene triphosphateX-RAY DIFFRACTION216enzyme,polymerase,transferase
161
2E42|1|C+2E42|1|D		Crystal structure of C/EBPbeta Bzip homodimer V285A mutant bound to A High Affinity DNA fragmentX-RAY DIFFRACTION1.816B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,leucine zipper (bZIP),regulatory,transcription
162
3LAJ|1|G+3LAJ|1|H		The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-arginine.X-RAY DIFFRACTION2.30616DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
163
1ZJM|1|T+1ZJM|1|P+1ZJM|1|D		Human DNA Polymerase beta complexed with DNA containing an A-A mismatched primer terminusX-RAY DIFFRACTION2.116enzyme,polymerase,transferase
164
2WT7|1|C+2WT7|1|D		Crystal structure of the bZIP heterodimeric complex MafB:cFos bound to DNAX-RAY DIFFRACTION2.316B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,leucine zipper (bZIP),regulatory,transcription
165
2HHU|1|C+2HHU|1|B		C:O6-methyl-guanine in the polymerase postinsertion site (-1 basepair position)X-RAY DIFFRACTION1.816B-form double helix,double helix,structureenzyme,polymerase,transferase
166
3JPP|1|T+3JPP|1|P+3JPP|1|D		Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-MonoMethyl Methylene triphosphateX-RAY DIFFRACTION2.116enzyme,polymerase,transferase
167
2VE9|1|I+2VE9|1|J		Xray structure of KOPS bound gamma domain of FtsK (P. aeruginosa)X-RAY DIFFRACTION1.916B-form double helix,double helix,structurecell cycle,regulatory
168
3JPQ|1|T+3JPQ|1|P+3JPQ|1|D		Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monoBromo methylene triphosphateX-RAY DIFFRACTION1.916enzyme,polymerase,transferase
169
3LAP|1|I+3LAP|1|J		The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-canavanine.X-RAY DIFFRACTION2.1516DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
170
2GEQ|1|C+2GEQ|1|D		Crystal Structure of a p53 Core Dimer Bound to DNAX-RAY DIFFRACTION2.316B-form double helix,double helix,structureDNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
171
2FMP|1|T+2FMP|1|P+2FMP|1|D		DNA Polymerase beta with a terminated gapped DNA substrate and ddCTP with sodium in the catalytic siteX-RAY DIFFRACTION1.6516enzyme,polymerase,transferase
172
1L2C|1|B+1L2C|1|C		MutM (Fpg)-DNA Estranged Thymine Mismatch Recognition ComplexX-RAY DIFFRACTION2.216double helix,structureenzyme,hydrolase
173
3MFH|1|T+3MFH|1|P		DNA Polymerase Eta in Complex With Undamaged DNAX-RAY DIFFRACTION216double helix,structureenzyme,polymerase,transferase
174
3LAP|1|G+3LAP|1|H		The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-canavanine.X-RAY DIFFRACTION2.1516DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
175
1L1Z|1|B+1L1Z|1|C		MutM (Fpg) Covalent-DNA IntermediateX-RAY DIFFRACTION1.716B-form double helix,double helix,structureenzyme,hydrolase
176
3COA|1|A+3COA|1|B		Crystal Structure of FoxO1 DBD Bound to IRE DNAX-RAY DIFFRACTION2.216B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
177
3IAY|1|T+3IAY|1|P		Ternary complex of DNA polymerase deltaX-RAY DIFFRACTION216B-form double helix,double helix,structureenzyme,polymerase,transferase
178
3M8R|1|C+3M8R|1|B		Crystal structure of the large fragment of DNA polymerase I from Thermus aquaticus in a closed ternary complex with trapped 4'-ethylated dTTPX-RAY DIFFRACTION216double helix,structureenzyme,polymerase,transferase
179
3ISD|1|T+3ISD|1|P+3ISD|1|D		Ternary complex of human DNA polymerase beta with an abasic site (THF): DAPCPP mismatchX-RAY DIFFRACTION2.616enzyme,polymerase,transferase
180
3JPN|1|T+3JPN|1|P+3JPN|1|D		Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-dichloro methylene triphosphateX-RAY DIFFRACTION2.1516enzyme,polymerase,transferase
181
1N4L|1|B+1N4L|1|D		A DNA analogue of the polypurine tract of HIV-1X-RAY DIFFRACTION216enzyme,polymerase,transferase
182
2HHV|1|C+2HHV|1|B		T:O6-methyl-guanine in the polymerase-2 basepair positionX-RAY DIFFRACTION1.5516B-form double helix,double helix,structureenzyme,polymerase,transferase
183
2E43|1|C+2E43|1|D		Crystal structure of C/EBPbeta Bzip homodimer K269A mutant bound to A High Affinity DNA fragmentX-RAY DIFFRACTION2.116B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,leucine zipper (bZIP),regulatory,transcription
184
3LAJ|1|I+3LAJ|1|J		The Structure of the Intermediate Complex of the Arginine Repressor from Mycobacterium tuberculosis Bound to its DNA Operator and L-arginine.X-RAY DIFFRACTION2.30616DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
185
3ERE|1|A+3ERE|1|B		Crystal structure of the arginine repressor protein from Mycobacterium tuberculosis in complex with the DNA operatorX-RAY DIFFRACTION2.516B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
186
1N48|1|C+1N48|1|B		Y-family DNA polymerase Dpo4 in complex with DNA containing abasic lesionX-RAY DIFFRACTION2.216enzyme,polymerase,transferase

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