Equivalence class DNA_4.0_97600.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2ISZ|1|E+ 2ISZ|1|F (rep) | mbtA/mbtB operator strand 1, mbtA/mbtB operator strand 2 | Crystal structure of a two-domain IdeR-DNA complex crystal form I | X-ray diffraction | 2.403 | 2007-02-13 | ||||
| 2 | 1U8R|1|E+ 1U8R|1|F | mbtA operator DNA, mbtB operator DNA | Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions | X-ray diffraction | 2.75 | 2004-10-05 | ||||
| 3 | 1U8R|1|K+ 1U8R|1|L | mbtA operator DNA, mbtB operator DNA | Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions | X-ray diffraction | 2.75 | 2004-10-05 | ||||
| 4 | 2IT0|1|E+ 2IT0|1|F | mbtA/mbtB operator strand 1, mbtA/mbtB operator strand 2 | Crystal structure of a two-domain IdeR-DNA complex crystal form II | X-ray diffraction | 2.6 | 2007-02-13 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1U8R|1|E+1U8R|1|F | Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions | X-RAY DIFFRACTION | 2.75 | 33 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead |
| 2 | 1U8R|1|K+1U8R|1|L | Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions | X-RAY DIFFRACTION | 2.75 | 33 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead |
| 3 | 2IT0|1|E+2IT0|1|F | Crystal structure of a two-domain IdeR-DNA complex crystal form II | X-RAY DIFFRACTION | 2.6 | 33 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead |
| 4 | 2ISZ|1|E+2ISZ|1|F | Crystal structure of a two-domain IdeR-DNA complex crystal form I | X-RAY DIFFRACTION | 2.403 | 33 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead |
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