Equivalence class DNA_4.0_94544.1 Current
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
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1 | 1U1Q|1|B (rep) | 5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*(OIP)*GP*G)-3' | Crystal Structure of UP1 Complexed With d(TTAGGGTTA(DI)GG); A Human Telomeric Repeat Containing Inosine | X-ray diffraction | 1.8 | 2004-09-21 | ||||
2 | 1U1N|1|B | 5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*(PRN)P*GP*G)-3' | Crystal Structure of UP1 Complexed With d(TTAGGGTTA (PRN)GG); A Human Telomeric Repeat Containing Nebularine | X-ray diffraction | 2.1 | 2004-09-21 | ||||
3 | 1PO6|1|B | 5'-D(*T*AP*GP*GP*(6MI)P*TP*TP*AP*GP*GP*G)-3' | Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI) | X-ray diffraction | 2.1 | 2003-11-11 | ||||
4 | 1U1R|1|B | 5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*(2PR)P*G)-3' | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(2PR)G); A Human Telomeric Repeat Containing 2-aminopurine | X-ray diffraction | 1.8 | 2004-09-21 | ||||
5 | 1U1L|1|B | 5'-D(*TP*AP*GP*GP*GP*TP*TP*(PRN)P*GP*GP*G)-3' | Crystal Structure of UP1 Complexed With d(TTAGGGTT PRN GGG); A Human Telomeric Repeat Containing nebularine | X-ray diffraction | 2 | 2004-09-21 | ||||
6 | 1U1K|1|B | 5'-D(*TP*AP*GP*GP*GP*TP*TP*(7DA)P*GP*GP*G)-3' | Crystal Structure of UP1 Complexed With d(TTAGGGTT 7DA GGG); A Human Telomeric Repeat Containing 7-deaza-adenine | X-ray diffraction | 2 | 2004-09-21 | ||||
7 | 1U1O|1|B | 5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*(OIP)*G)-3' | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(DI)G); A Human Telomeric Repeat Containing Inosine | X-ray diffraction | 2 | 2004-09-21 | ||||
8 | 1U1M|1|B | 5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*(7GU)P*GP*G)-3' | Crystal Structure of UP1 Complexed With d(TTAGGGTTA 7GU GG); A Human Telomeric Repeat Containing 7-deaza-guanine | X-ray diffraction | 2 | 2004-09-21 | ||||
9 | 2UP1|1|B | DNA (5'-D(P*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3') | STRUCTURE OF UP1-TELOMERIC DNA COMPLEX | X-ray diffraction | 2.1 | 1999-11-10 |
Release history
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 1U1M|1|B | Crystal Structure of UP1 Complexed With d(TTAGGGTTA 7GU GG); A Human Telomeric Repeat Containing 7-deaza-guanine | X-RAY DIFFRACTION | 2 | 11 | ribonucleoprotein,structural | |
2 | 1PO6|1|B | Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI) | X-RAY DIFFRACTION | 2.1 | 11 | ribonucleoprotein,structural | |
3 | 1U1L|1|B | Crystal Structure of UP1 Complexed With d(TTAGGGTT PRN GGG); A Human Telomeric Repeat Containing nebularine | X-RAY DIFFRACTION | 2 | 11 | ribonucleoprotein,structural | |
4 | 1U1O|1|B | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(DI)G); A Human Telomeric Repeat Containing Inosine | X-RAY DIFFRACTION | 2 | 11 | ribonucleoprotein,structural | |
5 | 1U1Q|1|B | Crystal Structure of UP1 Complexed With d(TTAGGGTTA(DI)GG); A Human Telomeric Repeat Containing Inosine | X-RAY DIFFRACTION | 1.8 | 11 | ribonucleoprotein,structural | |
6 | 2UP1|1|B | STRUCTURE OF UP1-TELOMERIC DNA COMPLEX | X-RAY DIFFRACTION | 2.1 | 11 | ribonucleoprotein,structural | |
7 | 1U1N|1|B | Crystal Structure of UP1 Complexed With d(TTAGGGTTA (PRN)GG); A Human Telomeric Repeat Containing Nebularine | X-RAY DIFFRACTION | 2.1 | 11 | ribonucleoprotein,structural | |
8 | 1U1R|1|B | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(2PR)G); A Human Telomeric Repeat Containing 2-aminopurine | X-RAY DIFFRACTION | 1.8 | 11 | ribonucleoprotein,structural | |
9 | 1U1K|1|B | Crystal Structure of UP1 Complexed With d(TTAGGGTT 7DA GGG); A Human Telomeric Repeat Containing 7-deaza-adenine | X-RAY DIFFRACTION | 2 | 11 | ribonucleoprotein,structural |
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