Equivalence class DNA_4.0_92720.1 Current
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 2B2B|1|A+ 2B2B|1|B (rep) | 5'-D(*CP*CP*GP*CP*TP*AP*GP*CP*GP*G)-3' | Structural distortions in psoralen cross-linked DNA | X-ray diffraction | 1.5 | 2006-10-03 | ||||
2 | 1FHY|1|A+ 1FHY|1|B | DNA (5'-D(*CP*CP*GP*CP*TP*AP*GP*CP*GP*G)-3') | PSORALEN CROSS-LINKED D(CCGCTAGCGG) FORMS HOLLIDAY JUNCTION | X-ray diffraction | 2.2 | 2001-04-21 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 2B2B|1|A+2B2B|1|B | Structural distortions in psoralen cross-linked DNA | X-RAY DIFFRACTION | 1.5 | 10 | Holliday junction,structure | |
2 | 1FHY|1|A+1FHY|1|B | PSORALEN CROSS-LINKED D(CCGCTAGCGG) FORMS HOLLIDAY JUNCTION | X-RAY DIFFRACTION | 2.2 | 10 | Holliday junction,structure |
Coloring options: