Equivalence class DNA_4.0_88474.1 Current
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 2PE5|1|D+ 2PE5|1|E (rep) | DNA (5'-D(*DAP*DAP*DTP*DTP*DGP*DTP*DGP*DAP*DGP*DCP*DGP*DCP*DTP*DCP*DAP*DCP*DAP*DAP*DTP*DT)-3') | synthetic construct | Crystal Structure of the Lac Repressor bound to ONPG in repressed state | X-ray diffraction | 3.5 | 2008-03-18 | |||
2 | 2PE5|1|F | DNA (5'-D(*DAP*DAP*DTP*DTP*DGP*DTP*DGP*DAP*DGP*DCP*DGP*DCP*DTP*DCP*DAP*DCP*DAP*DAP*DTP*DT)-3') | synthetic construct | Crystal Structure of the Lac Repressor bound to ONPG in repressed state | X-ray diffraction | 3.5 | 2008-03-18 |
Release history
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 2PE5|1|D+2PE5|1|E | Crystal Structure of the Lac Repressor bound to ONPG in repressed state | X-RAY DIFFRACTION | 3.5 | 20 | double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),lambda repressor-like,regulatory,transcription |
2 | 2PE5|1|F | Crystal Structure of the Lac Repressor bound to ONPG in repressed state | X-RAY DIFFRACTION | 3.5 | 20 | double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),lambda repressor-like,regulatory,transcription |
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