Equivalence class DNA_4.0_72569.1 Current
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1YQR|1|B+ 1YQR|1|C (rep) | 5'-D(P*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*G)-3', 5'-D(P*CP*GP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3' | Catalytically inactive human 8-oxoguanine glycosylase crosslinked to oxoG containing DNA | X-ray diffraction | 2.43 | 2005-04-05 | ||||
2 | 3IH7|1|B+ 3IH7|1|C | 5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*G)-3', 5'-D(AP*TP*CP*TP*GP*GP*AP*CP*CP*TP*GP*CP*A)-3' | Crystal structure of catalytically active human 8-oxoguanine glycosylase distally crosslinked to guanine-containing DNA | X-ray diffraction | 3.1 | 2010-11-03 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 1YQR|1|B+1YQR|1|C | Catalytically inactive human 8-oxoguanine glycosylase crosslinked to oxoG containing DNA | X-RAY DIFFRACTION | 2.43 | 14 | B-form double helix,double helix,structure | enzyme,hydrolase |
2 | 3IH7|1|B+3IH7|1|C | Crystal structure of catalytically active human 8-oxoguanine glycosylase distally crosslinked to guanine-containing DNA | X-RAY DIFFRACTION | 3.1 | 14 | B-form double helix,double helix,structure | enzyme,hydrolase |
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