Equivalence class DNA_4.0_70787.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2O6M|1|C+ 2O6M|1|D (rep) | 5'-D(*DTP*DTP*DGP*DAP*DCP*DTP*DCP*DTP*DCP*DTP*DTP*DAP*DAP*DGP*DAP*DGP*DAP*DGP*DTP*DCP*DA)-3' | H98Q mutant of the homing endonuclease I-PPOI complexed with DNA | X-ray diffraction | 2.3 | 2007-10-30 | ||||
| 2 | 1CYQ|1|C+ 1CYQ|1|D | 5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3' | INTRON ENCODED HOMING ENDONUCLEASE I-PPOI (H98A)/DNA HOMING SITE COMPLEX | X-ray diffraction | 1.93 | 1999-11-19 | ||||
| 3 | 1CZ0|1|C+ 1CZ0|1|D | DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3') | INTRON ENCODED HOMING ENDONUCLEASE I-PPOI/DNA COMPLEX LACKING CATALYTIC METAL ION | X-ray diffraction | 2.1 | 1999-11-19 | ||||
| 4 | 1A74|1|C+ 1A74|1|D | DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*A P*GP*TP*CP*A)-3') | I-PPOL HOMING ENDONUCLEASE/DNA COMPLEX | X-ray diffraction | 2.2 | 1998-06-22 | ||||
| 5 | 1IPP|1|C+ 1IPP|1|D | DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3') | HOMING ENDONUCLEASE/DNA COMPLEX | X-ray diffraction | 2.2 | 1998-09-02 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2O6M|1|C+2O6M|1|D | H98Q mutant of the homing endonuclease I-PPOI complexed with DNA | X-RAY DIFFRACTION | 2.3 | 21 | double helix,structure | enzyme,hydrolase,nuclease |
| 2 | 1CYQ|1|C+1CYQ|1|D | INTRON ENCODED HOMING ENDONUCLEASE I-PPOI (H98A)/DNA HOMING SITE COMPLEX | X-RAY DIFFRACTION | 1.93 | 21 | double helix,structure | enzyme,hydrolase,nuclease |
| 3 | 1CZ0|1|C+1CZ0|1|D | INTRON ENCODED HOMING ENDONUCLEASE I-PPOI/DNA COMPLEX LACKING CATALYTIC METAL ION | X-RAY DIFFRACTION | 2.1 | 21 | double helix,structure | enzyme,hydrolase,nuclease |
| 4 | 1A74|1|C+1A74|1|D | I-PPOL HOMING ENDONUCLEASE/DNA COMPLEX | X-RAY DIFFRACTION | 2.2 | 21 | double helix,structure | enzyme,hydrolase,nuclease |
| 5 | 1IPP|1|C+1IPP|1|D | HOMING ENDONUCLEASE/DNA COMPLEX | X-RAY DIFFRACTION | 2.2 | 21 | double helix,structure | enzyme,hydrolase,nuclease |
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