Equivalence class DNA_4.0_69163.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3C29|1|C+ 3C29|1|D (rep) | LoxP DNA, chain C,, LoxP DNA, chain D,F | Cre-loxP Synaptic structure | X-ray diffraction | 2.2 | 2009-02-17 | ||||
| 2 | 4CRX|1|C+ 4CRX|1|D | DNA (35 NUCLEOTIDE CRE RECOGNITION SITE) | ASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE | X-ray diffraction | 2.2 | 1999-06-14 | ||||
| 3 | 2HOF|1|C+ 2HOF|1|D | LoxP DNA | Crystal structure of the pre-cleavage synaptic complex in the cre-loxp site-specific recombination | X-ray diffraction | 2.4 | 2007-06-26 | ||||
| 4 | 2HOI|1|C+ 2HOI|1|D | LoxP DNA | Crystal structure of the tetrameric pre-cleavage synaptic complex in the cre-loxp site-specific recombination | X-ray diffraction | 2.601 | 2007-06-26 | ||||
| 5 | 2HOI|1|E+ 2HOI|1|F | LoxP DNA | Crystal structure of the tetrameric pre-cleavage synaptic complex in the cre-loxp site-specific recombination | X-ray diffraction | 2.601 | 2007-06-26 | ||||
| 6 | 5CRX|1|C+ 5CRX|1|D | DNA (35-MER) | ASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE | X-ray diffraction | 2.7 | 1999-07-07 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3C29|1|C+3C29|1|D | Cre-loxP Synaptic structure | X-RAY DIFFRACTION | 2.2 | 35 | enzyme,recombinase | |
| 2 | 2HOI|1|C+2HOI|1|D | Crystal structure of the tetrameric pre-cleavage synaptic complex in the cre-loxp site-specific recombination | X-RAY DIFFRACTION | 2.601 | 35 | enzyme,recombinase | |
| 3 | 2HOI|1|E+2HOI|1|F | Crystal structure of the tetrameric pre-cleavage synaptic complex in the cre-loxp site-specific recombination | X-RAY DIFFRACTION | 2.601 | 35 | enzyme,recombinase | |
| 4 | 5CRX|1|C+5CRX|1|D | ASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE | X-RAY DIFFRACTION | 2.7 | 35 | enzyme,recombinase | |
| 5 | 2HOF|1|C+2HOF|1|D | Crystal structure of the pre-cleavage synaptic complex in the cre-loxp site-specific recombination | X-RAY DIFFRACTION | 2.4 | 35 | enzyme,recombinase | |
| 6 | 4CRX|1|C+4CRX|1|D | ASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE | X-RAY DIFFRACTION | 2.2 | 35 | enzyme,recombinase |
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