Equivalence class DNA_4.0_64253.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2QS6|1|A (rep) | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 2 | 2QS6|1|B | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 3 | 2QS6|1|C | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 4 | 2QS6|1|D | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 5 | 2QS6|1|E | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 6 | 2QS6|1|F | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 7 | 2QS6|1|G | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 8 | 2QS6|1|H | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 9 | 2QS6|1|I | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 10 | 2QS6|1|J | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 11 | 2QS6|1|K | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 12 | 2QS6|1|L | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 13 | 2QS6|1|M | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 | ||||
| 14 | 2QS6|1|N | DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-ray diffraction | 3.08 | 2008-03-25 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2QS6|1|A | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 2 | 2QS6|1|C | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 3 | 2QS6|1|K | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 4 | 2QS6|1|J | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 5 | 2QS6|1|L | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 6 | 2QS6|1|F | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 7 | 2QS6|1|G | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 8 | 2QS6|1|D | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 9 | 2QS6|1|E | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 10 | 2QS6|1|N | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 11 | 2QS6|1|B | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 12 | 2QS6|1|H | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 13 | 2QS6|1|M | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix | |
| 14 | 2QS6|1|I | Structure of a Hoogsteen antiparallel duplex with extra-helical thymines | X-RAY DIFFRACTION | 3.08 | 8 | structure,triple helix |
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