Equivalence class DNA_4.0_58163.2 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1TEZ|1|N (rep) | 5'-D(P*GP*CP*CP*GP*A)-3' | COMPLEX BETWEEN DNA AND THE DNA PHOTOLYASE FROM ANACYSTIS NIDULANS | X-ray diffraction | 1.8 | 2004-12-14 | ||||
| 2 | 1TEZ|1|P | 5'-D(P*GP*CP*CP*GP*A)-3' | COMPLEX BETWEEN DNA AND THE DNA PHOTOLYASE FROM ANACYSTIS NIDULANS | X-ray diffraction | 1.8 | 2004-12-14 | ||||
| 3 | 2PJR|1|I+ 2PJR|1|H | DNA (5'-D(*AP*CP*TP*GP*C)-3'), DNA (5'-D(*GP*C)-3') | HELICASE PRODUCT COMPLEX | X-ray diffraction | 2.9 | 1999-04-08 | ||||
| 4 | 1PLY|1|A+ 1PLY|1|B | DNA (5'-D(P*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*T)-3') | SODIUM IONS AND WATER MOLECULES IN THE STRUCTURE OF POLY D(A)(DOT)POLY D(T) | Fiber diffraction | 3.2 | 1995-06-03 |
Release history
| Release | 0.19 |
|---|---|
| Date | 2011-05-28 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1TEZ|1|P | COMPLEX BETWEEN DNA AND THE DNA PHOTOLYASE FROM ANACYSTIS NIDULANS | X-RAY DIFFRACTION | 1.8 | 5 | enzyme,lyase | |
| 2 | 1TEZ|1|N | COMPLEX BETWEEN DNA AND THE DNA PHOTOLYASE FROM ANACYSTIS NIDULANS | X-RAY DIFFRACTION | 1.8 | 5 | enzyme,lyase | |
| 3 | 1PLY|1|A+1PLY|1|B | SODIUM IONS AND WATER MOLECULES IN THE STRUCTURE OF POLY D(A)(DOT)POLY D(T) | FIBER DIFFRACTION | 3.2 | 5 | B-form double helix,double helix,structure | |
| 4 | 2PJR|1|I+2PJR|1|H | HELICASE PRODUCT COMPLEX | X-RAY DIFFRACTION | 2.9 | 5 | enzyme,helicase,hydrolase |
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