Equivalence class DNA_4.0_55339.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2ITL|1|C+ 2ITL|1|W (rep) | 24-nt PEN element of the SV40 DNA origin | The origin binding domain of the SV40 large T antigen bound to the functional pen palindrome DNA (23 bp) | X-ray diffraction | 1.65 | 2006-12-12 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 2ITL|1|C+2ITL|1|W | The origin binding domain of the SV40 large T antigen bound to the functional pen palindrome DNA (23 bp) | X-RAY DIFFRACTION | 1.65 | 24 | double helix,feature,mispair,structure | DNA replication/repair,enzyme,helicase,hydrolase,regulatory |
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