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Equivalence class DNA_4.0_47971.1 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11F44|1|N+ 1F44|1|M (rep)DNA (5'-D(*AP*TP*AP*TP*GP*CP*TP*AP*TP*AP*CP*GP*AP*AP*GP*TP*TP*AP*T)-3'), DNA (5'- D(*TP*AP*TP*AP*AP*CP*TP*TP*CP*GP*TP*AP*TP*AP*GP*C)-3')CRYSTAL STRUCTURE OF TRIMERIC CRE RECOMBINASE-LOX COMPLEXX-ray diffraction2.052001-10-12
22ASD|1|E+ 2ASD|1|D5'-D(*CP*T*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3'oxoG-modified Insertion Ternary ComplexX-ray diffraction1.952006-01-10
32ASD|1|J+ 2ASD|1|H5'-D(*CP*T*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3'oxoG-modified Insertion Ternary ComplexX-ray diffraction1.952006-01-10
41DRG|1|C+ 1DRG|1|B5'-D(*AP*TP*AP*TP*GP*CP*TP*AP*TP*AP*CP*GP*AP*AP*GP*TP*TP*AP*T)-3', 5'-D(*TP*AP*TP*AP*AP*CP*TP*TP*CP*GP*TP*AP*TP*AP*GP*C)-3'CRYSTAL STRUCTURE OF TRIMERIC CRE RECOMBINASE-LOX COMPLEXX-ray diffraction2.552001-10-19
53OYM|1|C+ 3OYM|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the PFV N224H mutant intasome bound to manganeseX-ray diffraction2.022010-11-17
62C9L|1|A+ 2C9L|1|B5'-D(*AP*AP*GP*CP*AP*CP*TP*GP*AP*CP *TP*CP*AP*TP*GP*AP*AP*GP*T)-3', 5'-D(*AP*CP*TP*TP*CP*AP*CP*TP*GP*AP *GP*TP*CP*AP*GP*TP*GP*CP*T)-3'Human gammaherpesvirus 4Structure of the Epstein-Barr virus ZEBRA proteinX-ray diffraction2.252006-02-21
73KMD|1|E+ 3KMD|1|F5'-D(*GP*GP*GP*CP*AP*TP*GP*CP*CP*TP*AP*GP*GP*CP*AP*TP*GP*CP*C)-3'Crystal structure of the p53 core domain bound to a full consensus site as a self-assembled tetramerX-ray diffraction2.152010-02-23
83OYL|1|C+ 3OYL|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the PFV S217H mutant intasome bound to magnesium and the INSTI MK2048X-ray diffraction2.542010-11-17
93OYB|1|C+ 3OYB|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI MK2048X-ray diffraction2.542010-11-17
103OY9|1|C+ 3OY9|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with manganese at 2.55 resolutionX-ray diffraction2.552010-10-20
113KHR|1|E+ 3KHR|1|D5'-D(*CP*C*TP*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*CP*(DDG))-3'Dpo4 post-extension ternary complex with the correct C opposite the 2-aminofluorene-guanine [AF]G lesionX-ray diffraction2.012010-02-16
123KHR|1|J+ 3KHR|1|H5'-D(*CP*C*TP*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*CP*(DDG))-3'Dpo4 post-extension ternary complex with the correct C opposite the 2-aminofluorene-guanine [AF]G lesionX-ray diffraction2.012010-02-16
133OYG|1|C+ 3OYG|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI Compound1 (CompoundG)X-ray diffraction2.562010-11-17
143OYC|1|C+ 3OYC|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI PICAX-ray diffraction2.662010-11-17
153OYF|1|C+ 3OYF|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI L-870,810X-ray diffraction2.512010-11-17
162ASJ|1|E+ 2ASJ|1|D5'-D(*CP*TP*AP*AP*CP*(8OG)*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3'oxoG-modified Preinsertion Binary ComplexX-ray diffraction2.352006-01-10
172ASJ|1|J+ 2ASJ|1|H5'-D(*CP*TP*AP*AP*CP*(8OG)*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3'oxoG-modified Preinsertion Binary ComplexX-ray diffraction2.352006-01-10
183K9F|1|F+ 3K9F|1|H+ 3K9F|1|E+ 3K9F|1|GDNA (5'-D(P*AP*GP*TP*CP*AP*TP*TP*CP*AP*TP*GP*AP*CP*CP*TP*TP*GP*GP*T)-3'), DNA (5'-D(P*GP*AP*CP*TP*AP*TP*GP*CP*AP*CP*GP*TP*AP*AP*AP*AP*CP*AP*G)-3'), DNA (5'-D(*AP*CP*CP*AP*AP*GP*GP*T*CP*AP*TP*GP*AP*AP*T)-3'), DNA (5'-D(*CP*TP*GP*TP*TP*TP*TP*A*CP*GP*TP*GP*CP*AP*T)-3')Detailed structural insight into the quinolone-DNA cleavage complex of type IIA topoisomerasesX-ray diffraction2.92009-10-27
193OYD|1|C+ 3OYD|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI GS9160X-ray diffraction2.542010-11-17
203OYA|1|C+ 3OYA|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and raltegravir at 2.65 resolutionX-ray diffraction2.652010-10-20
213OYN|1|C+ 3OYN|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the PFV N224H mutant intasome bound to magnesium and the INSTI MK2048X-ray diffraction2.682010-11-17
223L2R|1|C+ 3L2R|1|D5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*TP*GP*TP*A)-3', 5'-D(*TP*AP*CP*AP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesiumX-ray diffraction2.882010-02-09
233OYK|1|C+ 3OYK|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the PFV S217H mutant intasome bound to manganeseX-ray diffraction2.722010-11-17
243OYE|1|C+ 3OYE|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI Compound2X-ray diffraction2.742010-11-17
253OYH|1|C+ 3OYH|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI MK0536X-ray diffraction2.742010-11-17
263OS0|1|C+ 3OS0|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')PFV strand transfer complex (STC) at 2.81 A resolutionX-ray diffraction2.812010-11-17
273OYJ|1|C+ 3OYJ|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the PFV S217Q mutant intasome in complex with magnesium and the INSTI MK2048X-ray diffraction2.682010-11-17
283OYI|1|C+ 3OYI|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')Crystal structure of the PFV S217Q mutant intasome in complex with manganeseX-ray diffraction2.722010-11-17
293LTN|1|F+ 3LTN|1|H+ 3LTN|1|E+ 3LTN|1|G5'-D(P*AP*GP*TP*CP*AP*TP*TP*CP*AP*TP*GP*AP*CP*CP*TP*TP*GP*GP*T)-3', 5'-D(P*GP*AP*CP*TP*AP*TP*GP*CP*AP*CP*GP*TP*AP*AP*AP*AP*CP*AP*G)-3', 5'-D(*AP*CP*CP*AP*AP*GP*GP*T*CP*AP*TP*GP*AP*AP*T)-3', 5'-D(*CP*TP*GP*TP*TP*TP*TP*A*CP*GP*TP*GP*CP*AP*T)-3'Inhibitor-stabilized topoisomerase IV-DNA cleavage complex (S. pneumoniae)X-ray diffraction3.12010-05-05
303KSA|1|F+ 3KSA|1|H+ 3KSA|1|E+ 3KSA|1|G5'-D(P*AP*GP*TP*CP*AP*TP*TP*CP*AP*TP*GP*AP*CP*CP*TP*TP*GP*GP*T)-3', 5'-D(P*GP*AP*CP*TP*AP*TP*GP*CP*AP*CP*GP*TP*AP*AP*AP*AP*CP*AP*G)-3', 5'-D(*AP*CP*CP*AP*AP*GP*GP*T*CP*AP*TP*GP*AP*AP*T)-3', 5'-D(*CP*TP*GP*TP*TP*TP*TP*A*CP*GP*TP*GP*CP*AP*T)-3'Detailed structural insight into the DNA cleavage complex of type IIA topoisomerases (cleaved form)X-ray diffraction3.32010-05-05
313L2U|1|C+ 3L2U|1|D5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*TP*GP*TP*A)-3', 5'-D(*TP*AP*CP*AP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and GS9137 (Elvitegravir)X-ray diffraction3.152010-02-09
323L2W|1|C+ 3L2W|1|D5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*TP*GP*TP*A)-3', 5'-D(*TP*AP*CP*AP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with manganese and GS9137 (Elvitegravir)X-ray diffraction3.22010-02-09
333L2Q|1|C+ 3L2Q|1|D5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*TP*GP*TP*A)-3', 5'-D(*TP*AP*CP*AP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'Crystal structure of the Prototype Foamy Virus (PFV) intasome in apo formX-ray diffraction3.252010-02-09
341CRX|1|D+ 1CRX|1|F+ 1CRX|1|C+ 1CRX|1|EDNA (5'-D(*AP*TP*AP*TP*GP*CP*TP*AP*TP*AP*CP*GP*AP*AP*GP*TP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*CP*TP*TP*CP*GP*TP*AP*TP*AP*G)-3'), DNA (5'-D(P*AP*TP*AP*AP*CP*TP*TP*CP*GP*TP*AP*TP*AP*GP*C)-3')CRE RECOMBINASE/DNA COMPLEX REACTION INTERMEDIATE IX-ray diffraction2.41998-10-14
353GII|1|E+ 3GII|1|D5'-D(*CP*TP*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DA))-3'Dpo4 extension ternary complex with disordered A opposite an oxoG in anti conformationX-ray diffraction2.62009-05-19
361IGN|1|D+ 1IGN|1|CDNA (5'-D(*CP*CP*TP*GP*GP*TP*GP*TP*GP*TP*GP*GP*GP*TP*GP*TP*G P*CP*G)-3'), DNA (5'-D(*CP*CP*GP*CP*AP*CP*AP*CP*CP*CP*AP*CP*AP*CP*AP*CP*C P*AP*G)-3')DNA-BINDING DOMAIN OF RAP1 IN COMPLEX WITH TELOMERIC DNA SITEX-ray diffraction2.251997-01-27
371IGN|1|E+ 1IGN|1|FDNA (5'-D(*CP*CP*GP*CP*AP*CP*AP*CP*CP*CP*AP*CP*AP*CP*AP*CP*C P*AP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*GP*TP*GP*TP*GP*TP*GP*GP*GP*TP*GP*TP*G P*CP*G)-3')DNA-BINDING DOMAIN OF RAP1 IN COMPLEX WITH TELOMERIC DNA SITEX-ray diffraction2.251997-01-27
382ASL|1|E+ 2ASL|1|D5'-D(*CP*T*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DOC))-3'oxoG-modified Postinsertion Binary ComplexX-ray diffraction2.652006-01-10
392ASL|1|J+ 2ASL|1|H5'-D(*CP*T*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DOC))-3'oxoG-modified Postinsertion Binary ComplexX-ray diffraction2.652006-01-10
403L2V|1|C+ 3L2V|1|D5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*TP*GP*TP*A)-3', 5'-D(*TP*AP*CP*AP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3'Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with manganese and MK0518 (Raltegravir)X-ray diffraction3.22010-02-09
412H7H|1|X+ 2H7H|1|Y5'-D(*CP*GP*TP*CP*GP*AP*TP*GP*AP*CP*TP*CP*AP*TP*CP*GP*AP*CP*G)-3', 5'-D(*CP*GP*TP*CP*GP*AP*TP*GP*AP*GP*TP*CP*AP*TP*CP*GP*AP*CP*G)-3'Crystal structure of the JUN BZIP homodimer complexed with AP-1 DNAX-ray diffraction2.32007-06-12
423KHH|1|E+ 3KHH|1|D5'-D(*CP*CP*TP*A*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DOC))-3'Dpo4 extension ternary complex with a C base opposite the 2-aminofluorene-guanine [AF]G lesionX-ray diffraction2.72010-02-16
433KHH|1|J+ 3KHH|1|H5'-D(*CP*CP*TP*A*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DOC))-3'Dpo4 extension ternary complex with a C base opposite the 2-aminofluorene-guanine [AF]G lesionX-ray diffraction2.72010-02-16
442ATL|1|E+ 2ATL|1|D5'-D(*CP*T*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3'Unmodified Insertion Ternary ComplexX-ray diffraction2.82006-01-10
452ATL|1|J+ 2ATL|1|H5'-D(*CP*T*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3'Unmodified Insertion Ternary ComplexX-ray diffraction2.82006-01-10
463OS1|1|C+ 3OS1|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*(2DA))-3')PFV target capture complex (TCC) at 2.97 A resolutionX-ray diffraction2.972010-11-17
473PT6|1|C+ 3PT6|1|IDNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3')Crystal structure of mouse DNMT1(650-1602) in complex with DNAX-ray diffraction32010-12-29
483PT6|1|D+ 3PT6|1|JDNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3')Crystal structure of mouse DNMT1(650-1602) in complex with DNAX-ray diffraction32010-12-29
493PTA|1|B+ 3PTA|1|CDNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3')Crystal structure of human DNMT1(646-1600) in complex with DNAX-ray diffraction3.62010-12-29
503OS2|1|C+ 3OS2|1|DDNA (5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP*TP*CP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*GP*AP*AP*AP*TP*TP*CP*CP*AP*TP*GP*AP*CP*A)-3')PFV target capture complex (TCC) at 3.32 A resolutionX-ray diffraction3.322010-11-17
513KHG|1|E+ 3KHG|1|D5'-D(*C*CP*TP*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DA))-3'Dpo4 extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesionX-ray diffraction2.962010-02-16
523KHG|1|J+ 3KHG|1|H5'-D(*C*CP*TP*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DA))-3'Dpo4 extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesionX-ray diffraction2.962010-02-16
532RGR|1|D+ 2RGR|1|CDNATopoisomerase IIA bound to G-segment DNAX-ray diffraction32007-12-25
542AU0|1|E+ 2AU0|1|D5'-D(*CP*TP*AP*AP*CP*G*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3'Unmodified preinsertion binary complexX-ray diffraction2.72006-01-10
552AU0|1|J+ 2AU0|1|H5'-D(*CP*TP*AP*AP*CP*G*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3'Unmodified preinsertion binary complexX-ray diffraction2.72006-01-10
561H9T|1|X+ 1H9T|1|Y5'-D(*CP*AP*TP*CP*TP*GP*GP*TP*AP*CP*GP*AP* CP*CP*AP*GP*AP*TP*C)-3', 5'-D(*GP*AP*TP*CP*TP*GP*GP*TP*CP*GP*TP*AP* CP*CP*AP*GP*AP*TP*G)-3'FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATORX-ray diffraction3.252001-04-04
573FOF|1|F+ 3FOF|1|H+ 3FOF|1|E+ 3FOF|1|GDNA (5'-D(P*AP*GP*TP*CP*AP*TP*TP*CP*AP*TP*GP*AP*CP*CP*TP*TP*GP*GP*T)-3'), DNA (5'-D(P*GP*AP*CP*TP*AP*TP*GP*CP*AP*CP*GP*TP*AP*AP*AP*AP*CP*AP*G)-3'), DNA (5'-D(P*AP*CP*CP*AP*AP*GP*GP*TP*CP*AP*TP*GP*AP*AP*T)-3'), DNA (5'-D(P*CP*TP*GP*TP*TP*TP*TP*AP*CP*GP*TP*GP*CP*AP*T)-3')Structural insight into the quinolone-DNA cleavage complex of type IIA topoisomerasesX-ray diffraction42009-02-24
581ZR2|1|J+ 1ZR2|1|KTCAGTGTCCGATAATTTAT, TTATCGGACACTGStructure of a Synaptic gamma-delta Resolvase Tetramer Covalently Linked to two Cleaved DNAsX-ray diffraction3.92005-08-30
591ZR2|1|X+ 1ZR2|1|Y+ 1ZR2|1|ZTCAGTGTCCGATAATTTAT, TTATCGGACACTG, AAAStructure of a Synaptic gamma-delta Resolvase Tetramer Covalently Linked to two Cleaved DNAsX-ray diffraction3.92005-08-30
602HMI|1|E+ 2HMI|1|FDNA (5'-D(*AP*TP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*A)-3')HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB 28/DNA COMPLEXX-ray diffraction2.81998-10-14
611J5O|1|T+ 1J5O|1|P5'-D(*AP*TP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*A)-3'CRYSTAL STRUCTURE OF MET184ILE MUTANT OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DOUBLE STRANDED DNA TEMPLATE-PRIMERX-ray diffraction3.52002-06-14
621NGM|1|C+ 1NGM|1|D5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)-3', 5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)-3'Crystal structure of a yeast Brf1-TBP-DNA ternary complexX-ray diffraction2.952003-03-25
631NGM|1|G+ 1NGM|1|H5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)-3', 5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)-3'Crystal structure of a yeast Brf1-TBP-DNA ternary complexX-ray diffraction2.952003-03-25
641NGM|1|K+ 1NGM|1|L5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)-3', 5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)-3'Crystal structure of a yeast Brf1-TBP-DNA ternary complexX-ray diffraction2.952003-03-25
651NGM|1|O+ 1NGM|1|P5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)-3', 5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)-3'Crystal structure of a yeast Brf1-TBP-DNA ternary complexX-ray diffraction2.952003-03-25
661NKP|1|F+ 1NKP|1|G5'-D(*CP*GP*AP*GP*TP*AP*GP*CP*AP*CP*GP*TP*GP*CP*TP*AP*CP*TP*C)-3'Crystal structure of Myc-Max recognizing DNAX-ray diffraction1.82003-02-04
671NKP|1|H+ 1NKP|1|J5'-D(*CP*GP*AP*GP*TP*AP*GP*CP*AP*CP*GP*TP*GP*CP*TP*AP*CP*TP*C)-3'Crystal structure of Myc-Max recognizing DNAX-ray diffraction1.82003-02-04
681LAT|1|C+ 1LAT|1|DDNA (5'-D(*TP*TP*CP*CP*AP*GP*AP*AP*CP*AP*TP*GP*TP*TP*CP*TP*G P*GP*A)-3')GLUCOCORTICOID RECEPTOR MUTANT/DNA COMPLEXX-ray diffraction1.91996-04-03
691TRO|1|I+ 1TRO|1|J+ 1TRO|1|K+ 1TRO|1|LDNA (5'-D(*TP*GP*TP*AP*CP*TP*AP*GP*TP*TP*AP*AP*CP*TP*AP*GP*T P*AP*C)-3')CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTIONX-ray diffraction1.91994-01-31
701MJO|1|F+ 1MJO|1|GCONSENSUS DNA OPERATOR DUPLEX WITH THE CENTRAL TA STEP MUTATED TO ATMETHIONINE HOLOREPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR WITH THE CENTRAL TA STEP MUTATED TO ATX-ray diffraction2.11999-08-02
712DGC|1|BDNA (5'-D(*TP*GP*GP*AP*GP*AP*TP*GP*AP*CP*GP*TP*CP*AP*TP*CP*T P*CP*C)-3')GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DNAX-ray diffraction2.21996-03-08
721MJQ|1|E+ 1MJQ|1|FMUTATED MET CONSENSUS OPERATOR DUPLEXMETHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCEX-ray diffraction2.41999-08-02
731MJ2|1|F+ 1MJ2|1|GDNA (5'-D(*TP*TP*AP*GP*AP*CP*GP*TP*CP*TP*AP*GP*AP*CP*GP*TP*CP*TP*A)-3')METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO A CONSENSUS OPERATOR SEQUENCEX-ray diffraction2.41999-08-02
741MJQ|1|K+ 1MJQ|1|LMUTATED MET CONSENSUS OPERATOR DUPLEXMETHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCEX-ray diffraction2.41999-08-02
751R4O|1|C+ 1R4O|1|D5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*TP*CP*GP*AP*TP*GP*TP*TP*CP*TP*G)-3'Crystallographic analysis of the interaction of the glucocorticoid receptor with DNAX-ray diffraction2.52003-10-21
761B01|1|F+ 1B01|1|EDNA (5'-D(*GP*AP*TP*TP*GP*CP*AP*TP*TP*GP*AP*GP*TP*GP*CP*AP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*CP*GP*TP*GP*CP*AP*CP*TP*CP*AP*AP*TP*GP*CP*AP*AP*T)-3')TRANSCRIPTIONAL REPRESSOR COPG/DNA COMPLEXX-ray diffraction2.561999-11-19
771SVC|1|DDNA (5'-D(*AP*GP*AP*TP*GP*GP*GP*GP*AP*AP*TP*CP*CP*CP*CP*TP*A P*GP*A)-3')NFKB P50 HOMODIMER BOUND TO DNAX-ray diffraction2.61996-06-10
781D66|1|D+ 1D66|1|EDNA (5'-D(*CP*CP*GP*GP*AP*GP*GP*AP*CP*AP*GP*TP*CP*CP*TP*CP*C P*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*AP*GP*GP*AP*CP*TP*GP*TP*CP*CP*TP*CP*C P*GP*G)-3')DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEXX-ray diffraction2.71992-03-06
792DRP|1|B+ 2DRP|1|CDNA (5'-D(*CP*TP*AP*AP*TP*AP*AP*GP*GP*AP*TP*AP*AP*CP*GP*TP*C P*CP*G)-3'), DNA (5'-D(*TP*CP*GP*GP*AP*CP*GP*TP*TP*AP*TP*CP*CP*TP*TP*AP*T P*TP*A)-3')THE CRYSTAL STRUCTURE OF A TWO ZINC-FINGER PEPTIDE REVEALS AN EXTENSION TO THE RULES FOR ZINC-FINGER/DNA RECOGNITIONX-ray diffraction2.81994-08-31
802DRP|1|E+ 2DRP|1|FDNA (5'-D(*CP*TP*AP*AP*TP*AP*AP*GP*GP*AP*TP*AP*AP*CP*GP*TP*C P*CP*G)-3'), DNA (5'-D(*TP*CP*GP*GP*AP*CP*GP*TP*TP*AP*TP*CP*CP*TP*TP*AP*T P*TP*A)-3')THE CRYSTAL STRUCTURE OF A TWO ZINC-FINGER PEPTIDE REVEALS AN EXTENSION TO THE RULES FOR ZINC-FINGER/DNA RECOGNITIONX-ray diffraction2.81994-08-31
811GLU|1|C+ 1GLU|1|DDNA (5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*TP*CP*GP*AP*TP*GP*TP*TP*C P*TP*G)-3')CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNAX-ray diffraction2.91994-01-31
821DGC|1|BDNA (5'-D(*TP*GP*GP*AP*GP*AP*TP*GP*AP*CP*GP*TP*CP*AP*TP*CP*T P*CP*C)-3')THE X-RAY STRUCTURE OF THE GCN4-BZIP BOUND TO ATF/CREB SITE DNA SHOWS THE COMPLEX DEPENDS ON DNA FLEXIBILITYX-ray diffraction31994-06-22
831R4R|1|C+ 1R4R|1|D5'-D(*TP*CP*AP*GP*AP*AP*CP*AP*TP*GP*AP*TP*GP*TP*TP*CP*TP*CP*A)-3', 5'-D(*CP*TP*GP*AP*GP*AP*AP*CP*AP*TP*CP*AP*TP*GP*TP*TP*CP*TP*G)-3'Crystallographic analysis of the interaction of the glucocorticoid receptor with DNAX-ray diffraction32003-10-28
841ZR4|1|J+ 1ZR4|1|K+ 1ZR4|1|ITCAGTGTCCGATAATTTAT, TTATCGGACACTG, AAAStructure of a Synaptic gamma-delta Resolvase Tetramer Covalently linked to two Cleaved DNAsX-ray diffraction3.42005-08-30
851ZR4|1|M+ 1ZR4|1|N+ 1ZR4|1|OTCAGTGTCCGATAATTTAT, TTATCGGACACTG, AAAStructure of a Synaptic gamma-delta Resolvase Tetramer Covalently linked to two Cleaved DNAsX-ray diffraction3.42005-08-30
861ZR4|1|U+ 1ZR4|1|V+ 1ZR4|1|WTCAGTGTCCGATAATTTAT, TTATCGGACACTG, AAAStructure of a Synaptic gamma-delta Resolvase Tetramer Covalently linked to two Cleaved DNAsX-ray diffraction3.42005-08-30
871ZR4|1|X+ 1ZR4|1|Y+ 1ZR4|1|ZTCAGTGTCCGATAATTTAT, TTATCGGACACTG, AAAStructure of a Synaptic gamma-delta Resolvase Tetramer Covalently linked to two Cleaved DNAsX-ray diffraction3.42005-08-30

Release history

Release0.10.20.30.40.50.60.70.80.90.10
Date2011-02-052011-02-122011-02-162011-02-192011-02-262011-03-052011-03-122011-03-192011-03-262011-04-02

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
1
1SVC|1|D		NFKB P50 HOMODIMER BOUND TO DNAX-RAY DIFFRACTION2.619DNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
2
3OYC|1|C+3OYC|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI PICAX-RAY DIFFRACTION2.6619enzyme,recombinase
3
3OYM|1|C+3OYM|1|D		Crystal structure of the PFV N224H mutant intasome bound to manganeseX-RAY DIFFRACTION2.0219enzyme,recombinase
4
3OYJ|1|C+3OYJ|1|D		Crystal structure of the PFV S217Q mutant intasome in complex with magnesium and the INSTI MK2048X-RAY DIFFRACTION2.6819enzyme,recombinase
5
3OYB|1|C+3OYB|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI MK2048X-RAY DIFFRACTION2.5419enzyme,recombinase
6
3OYG|1|C+3OYG|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI Compound1 (CompoundG)X-RAY DIFFRACTION2.5619enzyme,recombinase
7
3OYF|1|C+3OYF|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI L-870,810X-RAY DIFFRACTION2.5119enzyme,recombinase
8
3OYH|1|C+3OYH|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI MK0536X-RAY DIFFRACTION2.7419enzyme,recombinase
9
3OYL|1|C+3OYL|1|D		Crystal structure of the PFV S217H mutant intasome bound to magnesium and the INSTI MK2048X-RAY DIFFRACTION2.5419enzyme,recombinase
10
3OYE|1|C+3OYE|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI Compound2X-RAY DIFFRACTION2.7419enzyme,recombinase
11
3OYK|1|C+3OYK|1|D		Crystal structure of the PFV S217H mutant intasome bound to manganeseX-RAY DIFFRACTION2.7219enzyme,recombinase
12
3OYN|1|C+3OYN|1|D		Crystal structure of the PFV N224H mutant intasome bound to magnesium and the INSTI MK2048X-RAY DIFFRACTION2.6819enzyme,recombinase
13
3OS1|1|C+3OS1|1|D		PFV target capture complex (TCC) at 2.97 A resolutionX-RAY DIFFRACTION2.9719enzyme,recombinase
14
3OS0|1|C+3OS0|1|D		PFV strand transfer complex (STC) at 2.81 A resolutionX-RAY DIFFRACTION2.8119enzyme,recombinase
15
3OYI|1|C+3OYI|1|D		Crystal structure of the PFV S217Q mutant intasome in complex with manganeseX-RAY DIFFRACTION2.7219enzyme,recombinase
16
3L2R|1|C+3L2R|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesiumX-RAY DIFFRACTION2.8819enzyme,recombinase
17
3OY9|1|C+3OY9|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with manganese at 2.55 resolutionX-RAY DIFFRACTION2.5519enzyme,recombinase
18
3OYA|1|C+3OYA|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and raltegravir at 2.65 resolutionX-RAY DIFFRACTION2.6519enzyme,recombinase
19
3OYD|1|C+3OYD|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and the INSTI GS9160X-RAY DIFFRACTION2.5419enzyme,recombinase
20
3OS2|1|C+3OS2|1|D		PFV target capture complex (TCC) at 3.32 A resolutionX-RAY DIFFRACTION3.3219enzyme,recombinase
21
3L2Q|1|C+3L2Q|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in apo formX-RAY DIFFRACTION3.2519enzyme,recombinase
22
3L2U|1|C+3L2U|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and GS9137 (Elvitegravir)X-RAY DIFFRACTION3.1519enzyme,recombinase
23
3L2V|1|C+3L2V|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with manganese and MK0518 (Raltegravir)X-RAY DIFFRACTION3.219enzyme,recombinase
24
3L2W|1|C+3L2W|1|D		Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with manganese and GS9137 (Elvitegravir)X-RAY DIFFRACTION3.219enzyme,recombinase
25
2ASD|1|J+2ASD|1|H		oxoG-modified Insertion Ternary ComplexX-RAY DIFFRACTION1.9519B-form double helix,double helix,structureenzyme,polymerase,transferase
26
2ASD|1|E+2ASD|1|D		oxoG-modified Insertion Ternary ComplexX-RAY DIFFRACTION1.9519B-form double helix,double helix,structureenzyme,polymerase,transferase
27
2ASL|1|J+2ASL|1|H		oxoG-modified Postinsertion Binary ComplexX-RAY DIFFRACTION2.6519B-form double helix,double helix,structureenzyme,polymerase,transferase
28
2ASL|1|E+2ASL|1|D		oxoG-modified Postinsertion Binary ComplexX-RAY DIFFRACTION2.6519B-form double helix,double helix,structureenzyme,polymerase,transferase
29
2AU0|1|E+2AU0|1|D		Unmodified preinsertion binary complexX-RAY DIFFRACTION2.719double helix,structureenzyme,polymerase,transferase
30
2ASJ|1|E+2ASJ|1|D		oxoG-modified Preinsertion Binary ComplexX-RAY DIFFRACTION2.3519double helix,structureenzyme,polymerase,transferase
31
2ASJ|1|J+2ASJ|1|H		oxoG-modified Preinsertion Binary ComplexX-RAY DIFFRACTION2.3519double helix,structureenzyme,polymerase,transferase
32
2ATL|1|E+2ATL|1|D		Unmodified Insertion Ternary ComplexX-RAY DIFFRACTION2.819B-form double helix,double helix,structureenzyme,polymerase,transferase
33
2ATL|1|J+2ATL|1|H		Unmodified Insertion Ternary ComplexX-RAY DIFFRACTION2.819B-form double helix,double helix,structureenzyme,polymerase,transferase
34
2AU0|1|J+2AU0|1|H		Unmodified preinsertion binary complexX-RAY DIFFRACTION2.719double helix,structureenzyme,polymerase,transferase
35
3GII|1|E+3GII|1|D		Dpo4 extension ternary complex with disordered A opposite an oxoG in anti conformationX-RAY DIFFRACTION2.619enzyme,polymerase,transferase
36
3KHG|1|E+3KHG|1|D		Dpo4 extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesionX-RAY DIFFRACTION2.9619double helix,structureenzyme,polymerase,transferase
37
3KHG|1|J+3KHG|1|H		Dpo4 extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesionX-RAY DIFFRACTION2.9619double helix,structureenzyme,polymerase,transferase
38
3KHR|1|J+3KHR|1|H		Dpo4 post-extension ternary complex with the correct C opposite the 2-aminofluorene-guanine [AF]G lesionX-RAY DIFFRACTION2.0119B-form double helix,double helix,structureenzyme,polymerase,transferase
39
1DGC|1|B		THE X-RAY STRUCTURE OF THE GCN4-BZIP BOUND TO ATF/CREB SITE DNA SHOWS THE COMPLEX DEPENDS ON DNA FLEXIBILITYX-RAY DIFFRACTION319B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,leucine zipper (bZIP),regulatory,transcription
40
3KHR|1|E+3KHR|1|D		Dpo4 post-extension ternary complex with the correct C opposite the 2-aminofluorene-guanine [AF]G lesionX-RAY DIFFRACTION2.0119B-form double helix,double helix,structureenzyme,polymerase,transferase
41
2HMI|1|E+2HMI|1|F		HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB 28/DNA COMPLEXX-RAY DIFFRACTION2.819double helix,structureantibody,enzyme,immune system,polymerase,regulatory,transferase
42
1J5O|1|T+1J5O|1|P		CRYSTAL STRUCTURE OF MET184ILE MUTANT OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DOUBLE STRANDED DNA TEMPLATE-PRIMERX-RAY DIFFRACTION3.519double helix,structureantibody,enzyme,immune system,polymerase,regulatory,transferase
43
1NGM|1|C+1NGM|1|D		Crystal structure of a yeast Brf1-TBP-DNA ternary complexX-RAY DIFFRACTION2.9519double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
44
1NGM|1|G+1NGM|1|H		Crystal structure of a yeast Brf1-TBP-DNA ternary complexX-RAY DIFFRACTION2.9519double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
45
1NGM|1|K+1NGM|1|L		Crystal structure of a yeast Brf1-TBP-DNA ternary complexX-RAY DIFFRACTION2.9519double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
46
1NGM|1|O+1NGM|1|P		Crystal structure of a yeast Brf1-TBP-DNA ternary complexX-RAY DIFFRACTION2.9519double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
47
3KHH|1|J+3KHH|1|H		Dpo4 extension ternary complex with a C base opposite the 2-aminofluorene-guanine [AF]G lesionX-RAY DIFFRACTION2.719B-form double helix,double helix,structureenzyme,polymerase,transferase
48
2RGR|1|D+2RGR|1|C		Topoisomerase IIA bound to G-segment DNAX-RAY DIFFRACTION319B-form double helix,double helix,structureenzyme,isomerase
49
3KSA|1|F+3KSA|1|H+3KSA|1|E+3KSA|1|G		Detailed structural insight into the DNA cleavage complex of type IIA topoisomerases (cleaved form)X-RAY DIFFRACTION3.319double helix,structureenzyme,isomerase
50
3FOF|1|F+3FOF|1|H+3FOF|1|E+3FOF|1|G		Structural insight into the quinolone-DNA cleavage complex of type IIA topoisomerasesX-RAY DIFFRACTION419B-form double helix,double helix,structureenzyme,isomerase
51
3K9F|1|F+3K9F|1|H+3K9F|1|E+3K9F|1|G		Detailed structural insight into the quinolone-DNA cleavage complex of type IIA topoisomerasesX-RAY DIFFRACTION2.919double helix,structureenzyme,isomerase
52
3LTN|1|F+3LTN|1|H+3LTN|1|E+3LTN|1|G		Inhibitor-stabilized topoisomerase IV-DNA cleavage complex (S. pneumoniae)X-RAY DIFFRACTION3.119double helix,structureenzyme,isomerase
53
1ZR2|1|J+1ZR2|1|K		Structure of a Synaptic gamma-delta Resolvase Tetramer Covalently Linked to two Cleaved DNAsX-RAY DIFFRACTION3.919enzyme,recombinase
54
1DRG|1|C+1DRG|1|B		CRYSTAL STRUCTURE OF TRIMERIC CRE RECOMBINASE-LOX COMPLEXX-RAY DIFFRACTION2.5519enzyme,recombinase
55
1CRX|1|D+1CRX|1|F+1CRX|1|C+1CRX|1|E		CRE RECOMBINASE/DNA COMPLEX REACTION INTERMEDIATE IX-RAY DIFFRACTION2.419enzyme,recombinase
56
1F44|1|N+1F44|1|M		CRYSTAL STRUCTURE OF TRIMERIC CRE RECOMBINASE-LOX COMPLEXX-RAY DIFFRACTION2.0519enzyme,recombinase
57
3KHH|1|E+3KHH|1|D		Dpo4 extension ternary complex with a C base opposite the 2-aminofluorene-guanine [AF]G lesionX-RAY DIFFRACTION2.719B-form double helix,double helix,structureenzyme,polymerase,transferase
58
1IGN|1|D+1IGN|1|C		DNA-BINDING DOMAIN OF RAP1 IN COMPLEX WITH TELOMERIC DNA SITEX-RAY DIFFRACTION2.2519DNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription
59
2C9L|1|A+2C9L|1|B		Structure of the Epstein-Barr virus ZEBRA proteinX-RAY DIFFRACTION2.2519B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,leucine zipper (bZIP),regulatory,transcription
60
2DGC|1|B		GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DNAX-RAY DIFFRACTION2.219B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,leucine zipper (bZIP),regulatory,transcription
61
2DRP|1|E+2DRP|1|F		THE CRYSTAL STRUCTURE OF A TWO ZINC-FINGER PEPTIDE REVEALS AN EXTENSION TO THE RULES FOR ZINC-FINGER/DNA RECOGNITIONX-RAY DIFFRACTION2.819B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
62
2DRP|1|B+2DRP|1|C		THE CRYSTAL STRUCTURE OF A TWO ZINC-FINGER PEPTIDE REVEALS AN EXTENSION TO THE RULES FOR ZINC-FINGER/DNA RECOGNITIONX-RAY DIFFRACTION2.819B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
63
1H9T|1|X+1H9T|1|Y		FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATORX-RAY DIFFRACTION3.2519double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
64
1GLU|1|C+1GLU|1|D		CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNAX-RAY DIFFRACTION2.919B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
65
1IGN|1|E+1IGN|1|F		DNA-BINDING DOMAIN OF RAP1 IN COMPLEX WITH TELOMERIC DNA SITEX-RAY DIFFRACTION2.2519DNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription
66
1R4R|1|C+1R4R|1|D		Crystallographic analysis of the interaction of the glucocorticoid receptor with DNAX-RAY DIFFRACTION319double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
67
1NKP|1|H+1NKP|1|J		Crystal structure of Myc-Max recognizing DNAX-RAY DIFFRACTION1.819B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,helix-loop-helix (bHLH),regulatory,transcription
68
1R4O|1|C+1R4O|1|D		Crystallographic analysis of the interaction of the glucocorticoid receptor with DNAX-RAY DIFFRACTION2.519B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
69
3KMD|1|E+3KMD|1|F		Crystal structure of the p53 core domain bound to a full consensus site as a self-assembled tetramerX-RAY DIFFRACTION2.1519B-form double helix,double helix,structureDNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
70
3PT6|1|D+3PT6|1|J		Crystal structure of mouse DNMT1(650-1602) in complex with DNAX-RAY DIFFRACTION319B-form double helix,double helix,structureenzyme,methylase,transferase
71
3PT6|1|C+3PT6|1|I		Crystal structure of mouse DNMT1(650-1602) in complex with DNAX-RAY DIFFRACTION319B-form double helix,double helix,structureenzyme,methylase,transferase
72
1D66|1|D+1D66|1|E		DNA RECOGNITION BY GAL4: STRUCTURE OF A PROTEIN/DNA COMPLEXX-RAY DIFFRACTION2.719double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,regulatory,transcription
73
1NKP|1|F+1NKP|1|G		Crystal structure of Myc-Max recognizing DNAX-RAY DIFFRACTION1.819B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,helix-loop-helix (bHLH),regulatory,transcription
74
1LAT|1|C+1LAT|1|D		GLUCOCORTICOID RECEPTOR MUTANT/DNA COMPLEXX-RAY DIFFRACTION1.919B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
75
1ZR4|1|U+1ZR4|1|V+1ZR4|1|W		Structure of a Synaptic gamma-delta Resolvase Tetramer Covalently linked to two Cleaved DNAsX-RAY DIFFRACTION3.419enzyme,recombinase
76
1ZR4|1|X+1ZR4|1|Y+1ZR4|1|Z		Structure of a Synaptic gamma-delta Resolvase Tetramer Covalently linked to two Cleaved DNAsX-RAY DIFFRACTION3.419enzyme,recombinase
77
1ZR4|1|M+1ZR4|1|N+1ZR4|1|O		Structure of a Synaptic gamma-delta Resolvase Tetramer Covalently linked to two Cleaved DNAsX-RAY DIFFRACTION3.419enzyme,recombinase
78
1ZR4|1|J+1ZR4|1|K+1ZR4|1|I		Structure of a Synaptic gamma-delta Resolvase Tetramer Covalently linked to two Cleaved DNAsX-RAY DIFFRACTION3.419enzyme,recombinase
79
1ZR2|1|X+1ZR2|1|Y+1ZR2|1|Z		Structure of a Synaptic gamma-delta Resolvase Tetramer Covalently Linked to two Cleaved DNAsX-RAY DIFFRACTION3.919enzyme,recombinase
80
3PTA|1|B+3PTA|1|C		Crystal structure of human DNMT1(646-1600) in complex with DNAX-RAY DIFFRACTION3.619B-form double helix,double helix,structureenzyme,methylase,transferase
81
2H7H|1|X+2H7H|1|Y		Crystal structure of the JUN BZIP homodimer complexed with AP-1 DNAX-RAY DIFFRACTION2.319B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,leucine zipper (bZIP),regulatory,transcription
82
1TRO|1|I+1TRO|1|J+1TRO|1|K+1TRO|1|L		CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTIONX-RAY DIFFRACTION1.919B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,trp repressor
83
1MJ2|1|F+1MJ2|1|G		METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO A CONSENSUS OPERATOR SEQUENCEX-RAY DIFFRACTION2.419DNA-binding transcription factor (TF),MetR homology,other α-helix,regulatory,transcription
84
1MJO|1|F+1MJO|1|G		METHIONINE HOLOREPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR WITH THE CENTRAL TA STEP MUTATED TO ATX-RAY DIFFRACTION2.119DNA-binding transcription factor (TF),MetR homology,other α-helix,regulatory,transcription
85
1MJQ|1|E+1MJQ|1|F		METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCEX-RAY DIFFRACTION2.419DNA-binding transcription factor (TF),MetR homology,other α-helix,regulatory,transcription
86
1MJQ|1|K+1MJQ|1|L		METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCEX-RAY DIFFRACTION2.419DNA-binding transcription factor (TF),MetR homology,other α-helix,regulatory,transcription
87
1B01|1|F+1B01|1|E		TRANSCRIPTIONAL REPRESSOR COPG/DNA COMPLEXX-RAY DIFFRACTION2.5619DNA-binding transcription factor (TF),MetR homology,other α-helix,regulatory,transcription

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