Equivalence class DNA_4.0_46844.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3F2C|1|T+ 3F2C|1|P (rep) | 5'-D(*DAP*DTP*DAP*DAP*DCP*DGP*DGP*DTP*DTP*DGP*DCP*DCP*DCP*DGP*DTP*DCP*DTP*DCP*DAP*DCP*DTP*DG)-3', 5'-D(*DCP*DAP*DGP*DTP*DGP*DAP*DGP*DAP*DCP*DGP*DGP*DGP*DCP*DAP*DAP*DCP*DC)-3' | DNA Polymerase PolC from Geobacillus kaustophilus complex with DNA, dGTP and Mn | X-ray diffraction | 2.5 | 2009-01-20 | ||||
| 2 | 3F2D|1|T+ 3F2D|1|P | 5'-D(*DAP*DTP*DAP*DAP*DCP*DGP*DGP*DTP*DTP*DGP*DCP*DCP*DCP*DGP*DTP*DCP*DTP*DCP*DAP*DCP*DTP*DG)-3', 5'-D(*DCP*DAP*DGP*DTP*DGP*DAP*DGP*DAP*DCP*DGP*DGP*DGP*DCP*DAP*DAP*DCP*DC)-3' | DNA Polymerase PolC from Geobacillus kaustophilus complex with DNA, dGTP, Mn and Zn | X-ray diffraction | 2.51 | 2009-01-20 | ||||
| 3 | 3F2B|1|T+ 3F2B|1|P | 5'-D(*DAP*DTP*DAP*DAP*DCP*DGP*DGP*DTP*DTP*DGP*DCP*DCP*DCP*DGP*DTP*DCP*DTP*DCP*DAP*DCP*DTP*DG)-3', 5'-D(*DCP*DAP*DGP*DTP*DGP*DAP*DGP*DAP*DCP*DGP*DGP*DGP*DCP*DAP*DAP*DCP*DC)-3' | DNA Polymerase PolC from Geobacillus kaustophilus complex with DNA, dGTP, Mg and Zn | X-ray diffraction | 2.39 | 2009-01-20 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3F2B|1|T+3F2B|1|P | DNA Polymerase PolC from Geobacillus kaustophilus complex with DNA, dGTP, Mg and Zn | X-RAY DIFFRACTION | 2.39 | 22 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 2 | 3F2C|1|T+3F2C|1|P | DNA Polymerase PolC from Geobacillus kaustophilus complex with DNA, dGTP and Mn | X-RAY DIFFRACTION | 2.5 | 22 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
| 3 | 3F2D|1|T+3F2D|1|P | DNA Polymerase PolC from Geobacillus kaustophilus complex with DNA, dGTP, Mn and Zn | X-RAY DIFFRACTION | 2.51 | 22 | B-form double helix,double helix,structure | enzyme,polymerase,transferase |
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