Equivalence class DNA_4.0_44061.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3OQM|1|B+ 3OQM|1|E (rep) | 5'-D(*TP*TP*GP*AP*TP*AP*AP*CP*GP*CP*TP*TP*AP*CP*AP*A)-3', 5'-D(*TP*TP*GP*TP*AP*AP*GP*CP*GP*TP*TP*AP*TP*CP*AP*A)-3' | Bacillus subtilis | structure of ccpa-hpr-ser46p-ackA2 complex | X-ray diffraction | 2.96 | 2010-12-08 | |||
| 2 | 3OQN|1|B+ 3OQN|1|E | 5'-D(*AP*TP*GP*GP*TP*AP*CP*CP*GP*CP*TP*TP*TP*CP*AP*A)-3', 5'-D(*TP*TP*GP*AP*AP*AP*GP*CP*GP*GP*TP*AP*CP*CP*AP*T)-3' | Bacillus subtilis | Structure of ccpa-hpr-ser46-p-gntr-down cre | X-ray diffraction | 3.3 | 2010-12-08 |
Release history
| Release | 0.22 |
|---|---|
| Date | 2011-06-18 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 3OQM|1|B+3OQM|1|E | structure of ccpa-hpr-ser46p-ackA2 complex | X-RAY DIFFRACTION | 2.96 | 16 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),enzyme,helix-turn-helix (HTH),kinase,lambda repressor-like,regulatory,transcription,transferase |
| 2 | 3OQN|1|B+3OQN|1|E | Structure of ccpa-hpr-ser46-p-gntr-down cre | X-RAY DIFFRACTION | 3.3 | 16 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),enzyme,helix-turn-helix (HTH),kinase,lambda repressor-like,regulatory,transcription,transferase |
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