Equivalence class DNA_4.0_43177.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1IJW|1|A+ 1IJW|1|B (rep) | 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3', 5'-D(*AP*TP*(CBR)P*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3' | Testing the Water-Mediated Hin Recombinase DNA Recognition by Systematic Mutations. | X-ray diffraction | 2.4 | 2002-02-22 | ||||
| 2 | 1JJ6|1|A+ 1JJ6|1|B | 5'-D(*TP*GP*TP*(5IT)P*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3', 5'-D(*AP*TP*CP*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3' | Testing the Water-Mediated Hin Recombinase DNA Recognition by Systematic Mutations. | X-ray diffraction | 2.3 | 2002-02-22 | ||||
| 3 | 1JKO|1|A+ 1JKO|1|B | 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*GP*TP*AP*AP*GP*A)-3', 5'-D(*AP*TP*CP*TP*TP*AP*CP*CP*AP*AP*AP*AP*AP*C)-3' | Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations | X-ray diffraction | 2.24 | 2002-02-22 | ||||
| 4 | 1JKR|1|A+ 1JKR|1|B | 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*CP*AP*AP*GP*A)-3', 5'-D(*AP*TP*CP*TP*TP*GP*TP*CP*AP*AP*AP*AP*AP*C)-3' | Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations | X-ray diffraction | 2.28 | 2002-02-22 | ||||
| 5 | 1JKP|1|A+ 1JKP|1|B | 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*GP*AP*AP*GP*A)-3', 5'-D(*AP*TP*CP*TP*TP*CP*TP*CP*AP*AP*AP*AP*AP*C)-3' | Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations | X-ray diffraction | 2.8 | 2002-02-22 | ||||
| 6 | 1JKQ|1|A+ 1JKQ|1|B | 5'-D(*TP*GP*TP*TP*TP*TP*TP*TP*AP*TP*AP*AP*GP*A)-3', 5'-D(*AP*TP*CP*TP*TP*AP*TP*AP*AP*AP*AP*AP*AP*C)-3' | Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations | X-ray diffraction | 2.86 | 2002-02-22 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1JKQ|1|A+1JKQ|1|B | Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations | X-RAY DIFFRACTION | 2.86 | 14 | B-form double helix,double helix,structure | enzyme,recombinase |
| 2 | 1IJW|1|A+1IJW|1|B | Testing the Water-Mediated Hin Recombinase DNA Recognition by Systematic Mutations. | X-RAY DIFFRACTION | 2.4 | 14 | B-form double helix,double helix,structure | enzyme,recombinase |
| 3 | 1JJ6|1|A+1JJ6|1|B | Testing the Water-Mediated Hin Recombinase DNA Recognition by Systematic Mutations. | X-RAY DIFFRACTION | 2.3 | 14 | B-form double helix,double helix,structure | enzyme,recombinase |
| 4 | 1JKR|1|A+1JKR|1|B | Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations | X-RAY DIFFRACTION | 2.28 | 14 | B-form double helix,double helix,structure | enzyme,recombinase |
| 5 | 1JKO|1|A+1JKO|1|B | Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations | X-RAY DIFFRACTION | 2.24 | 14 | B-form double helix,double helix,structure | enzyme,recombinase |
| 6 | 1JKP|1|A+1JKP|1|B | Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations | X-RAY DIFFRACTION | 2.8 | 14 | B-form double helix,double helix,structure | enzyme,recombinase |
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