Equivalence class DNA_4.0_43083.1 Current
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1TKD|1|T+ 1TKD|1|P (rep) | DNA (5'-D(*CP*CP*CP*AP*(8OG)P*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3'), DNA (5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*(DOC))-3') | T7 DNA polymerase ternary complex with 8 oxo guanosine and dCMP at the elongation site | X-ray diffraction | 2.49 | 2004-08-31 |
Release history
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
---|---|---|---|---|---|---|---|
1 | 1TKD|1|T+1TKD|1|P | T7 DNA polymerase ternary complex with 8 oxo guanosine and dCMP at the elongation site | X-RAY DIFFRACTION | 2.49 | 26 | B-form double helix,double helix,structure | enzyme,oxidoreductase,polymerase,transferase |
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