#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11QNA|1|C+ 1QNA|1|D (rep)DNA (5'-D(*GP*CP*TP*TP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*AP*AP*GP*C)-3')Crystal structure of the T(-30) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction1.82000-02-07
21QNA|1|E+ 1QNA|1|FDNA (5'-D(*GP*CP*TP*TP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*AP*AP*GP*C)-3')Crystal structure of the T(-30) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction1.82000-02-07
31QN4|1|C+ 1QN4|1|DDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*TP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*AP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the T(-24) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction1.862000-02-06
41QN4|1|E+ 1QN4|1|FDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*TP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*AP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the T(-24) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction1.862000-02-06
51QN9|1|C+ 1QN9|1|DDNA (5'-D(*GP*CP*TP*AP*CP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*GP*TP*AP*GP*C)-3')Crystal structure of the C(-29) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction1.92000-02-07
61QNE|1|C+ 1QNE|1|DDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the Adenovirus major late promoter TATA box bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2).X-ray diffraction1.92000-02-07
71QN9|1|E+ 1QN9|1|FDNA (5'-D(*GP*CP*TP*AP*CP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*GP*TP*AP*GP*C)-3')Crystal structure of the C(-29) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction1.92000-02-07
81QNE|1|E+ 1QNE|1|FDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the Adenovirus major late promoter TATA box bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2).X-ray diffraction1.92000-02-07
91QN5|1|C+ 1QN5|1|DDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*GP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*CP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the G(-26) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction1.932000-02-07
101QN5|1|E+ 1QN5|1|FDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*GP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*CP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the G(-26) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction1.932000-02-07
111QN3|1|C+ 1QN3|1|DDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*GP*TP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the C(-25) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction1.952000-02-06
121QN3|1|E+ 1QN3|1|FDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*GP*TP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the C(-25) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction1.952000-02-06
131QN6|1|C+ 1QN6|1|DDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*TP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*AP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the T(-26) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction2.12000-02-07
141QN8|1|C+ 1QN8|1|DDNA (5'-D(*GP*CP*TP*AP*TP*TP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*AP*AP*TP*AP*GP*C)-3')Crystal structure of the T(-28) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction2.12000-02-07
151QN8|1|E+ 1QN8|1|FDNA (5'-D(*GP*CP*TP*AP*TP*TP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*AP*AP*TP*AP*GP*C)-3')Crystal structure of the T(-28) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction2.12000-02-07
161QN6|1|E+ 1QN6|1|FDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*TP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*AP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the T(-26) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction2.12000-02-07
171QNB|1|C+ 1QNB|1|DDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*TP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*AP*TP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the T(-25) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction2.232000-02-07
181QNB|1|E+ 1QNB|1|FDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*TP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*AP*TP*TP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the T(-25) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction2.232000-02-07
191QN7|1|C+ 1QN7|1|DDNA (5'-D(*GP*CP*TP*AP*TP*AP*TP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*AP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the T(-27) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction2.32000-02-07
201QNC|1|C+ 1QNC|1|DDNA (5'-D(*GP*CP*AP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*TP*GP*C)-3')Crystal structure of the A(-31) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction2.32000-02-07
211QN7|1|E+ 1QN7|1|FDNA (5'-D(*GP*CP*TP*AP*TP*AP*TP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*AP*TP*AP*TP*AP*GP*C)-3')Crystal structure of the T(-27) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction2.32000-02-07
221QNC|1|E+ 1QNC|1|FDNA (5'-D(*GP*CP*AP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*TP*GP*C)-3')Crystal structure of the A(-31) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-ray diffraction2.32000-02-07

Release history

Release0.10.20.30.40.50.60.70.80.90.100.110.120.130.140.150.160.170.180.190.200.210.22
Date2011-02-052011-02-122011-02-162011-02-192011-02-262011-03-052011-03-122011-03-192011-03-262011-04-022011-04-092011-04-112011-04-162011-04-232011-04-302011-05-072011-05-142011-05-212011-05-282011-06-042011-06-112011-06-18

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
1
1QNA|1|E+1QNA|1|F
Crystal structure of the T(-30) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION1.814B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
2
1QNA|1|C+1QNA|1|D
Crystal structure of the T(-30) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION1.814B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
3
1QN3|1|C+1QN3|1|D
Crystal structure of the C(-25) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION1.9514β-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
4
1QN3|1|E+1QN3|1|F
Crystal structure of the C(-25) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION1.9514β-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
5
1QN9|1|C+1QN9|1|D
Crystal structure of the C(-29) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION1.914double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
6
1QN5|1|C+1QN5|1|D
Crystal structure of the G(-26) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION1.9314double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
7
1QN7|1|C+1QN7|1|D
Crystal structure of the T(-27) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION2.314B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
8
1QN6|1|C+1QN6|1|D
Crystal structure of the T(-26) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION2.114B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
9
1QNB|1|C+1QNB|1|D
Crystal structure of the T(-25) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION2.2314B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
10
1QN4|1|E+1QN4|1|F
Crystal structure of the T(-24) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION1.8614B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
11
1QNE|1|E+1QNE|1|F
Crystal structure of the Adenovirus major late promoter TATA box bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2).X-RAY DIFFRACTION1.914B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
12
1QN7|1|E+1QN7|1|F
Crystal structure of the T(-27) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION2.314B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
13
1QNB|1|E+1QNB|1|F
Crystal structure of the T(-25) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION2.2314B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
14
1QN6|1|E+1QN6|1|F
Crystal structure of the T(-26) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION2.114B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
15
1QN9|1|E+1QN9|1|F
Crystal structure of the C(-29) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION1.914double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
16
1QN5|1|E+1QN5|1|F
Crystal structure of the G(-26) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION1.9314double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
17
1QN8|1|E+1QN8|1|F
Crystal structure of the T(-28) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION2.114B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
18
1QN8|1|C+1QN8|1|D
Crystal structure of the T(-28) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION2.114B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
19
1QNC|1|E+1QNC|1|F
Crystal structure of the A(-31) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION2.314B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
20
1QNC|1|C+1QNC|1|D
Crystal structure of the A(-31) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION2.314B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
21
1QN4|1|C+1QN4|1|D
Crystal structure of the T(-24) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution.X-RAY DIFFRACTION1.8614B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
22
1QNE|1|C+1QNE|1|D
Crystal structure of the Adenovirus major late promoter TATA box bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2).X-RAY DIFFRACTION1.914B-form double helix,double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription

Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.0944 s