#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
1476D|1|A+ 476D|1|B (rep)5'-D(*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'CALCIUM FORM OF B-DNA UNDECAMER GCGAATTCGCGX-ray diffraction1.31999-07-19
22OAA|1|C+ 2OAA|1|D+ 2OAA|1|E+ 2OAA|1|F5'-D(*GP*GP*TP*AP*CP*CP*TP*GP*GP*AP*T)-3', 5'-D(*CP*AP*TP*CP*CP*AP*GP*GP*TP*AP*C)-3'Restriction endonuclease MvaI-cognate DNA substrate complexX-ray diffraction1.52007-02-20
32ODI|1|C+ 2ODI|1|D+ 2ODI|1|E+ 2ODI|1|F5'-D(*AP*AP*CP*CP*CP*GP*GP*AP*GP*AP*C)-3', 5'-D(*CP*TP*CP*CP*GP*GP*GP*TP*TP*GP*T)-3'Restriction Endonuclease BCNI-Cognate DNA Substrate ComplexX-ray diffraction1.452007-03-20
43GOX|1|C+ 3GOX|1|D5'-(*DCP*DTP*DCP*DGP*DAP*DCP*DGP*DTP*DAP*DGP*DA)-3', 5'-(*DTP*DAP*DCP*DGP*DTP*DCP*DGP*DAP*DGP*DTP*DC)-3'Crystal structure of the beta-beta-alpha-Me type II restriction endonuclease Hpy99I in the absence of EDTAX-ray diffraction1.52009-04-28
53BM3|1|C+ 3BM3|1|DDNA (5'-D(*CP*AP*TP*CP*CP*AP*GP*GP*TP*AP*C)-3'), DNA (5'-D(*GP*GP*TP*AP*CP*CP*TP*GP*GP*AP*T)-3')Restriction endonuclease PspGI-substrate DNA complexX-ray diffraction1.72008-09-16
63MR3|1|T+ 3MR3|1|PDNA (5'-D(*CP*AP*(TTD)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA (5'-D(*CP*AP*GP*CP*GP*TP*CP*AP*T)-3')Human DNA polymerase eta - DNA ternary complex with the 3'T of a CPD in the active site (TT1)X-ray diffraction1.752010-06-30
72NQ9|1|D+ 2NQ9|1|B+ 2NQ9|1|C5'-D(*AP*TP*AP*TP*CP*T)-3', 5'-D(P*(3DR)P*AP*GP*AP*T)-3', 5'-D(*AP*TP*CP*TP*GP*AP*AP*GP*TP*AP*T)-3'High resolution crystal structure of Escherichia coli endonuclease IV (Endo IV) Y72A mutant bound to damaged DNAX-ray diffraction1.452007-11-13
82Q10|1|C+ 2Q10|1|D+ 2Q10|1|E+ 2Q10|1|FDNA (5'-D(*AP*AP*CP*CP*CP*GP*GP*AP*GP*AP*C)-3'), DNA (5'-D(*CP*TP*CP*CP*GP*GP*GP*TP*TP*GP*T)-3')RESTRICTION ENDONUCLEASE BcnI (WILD TYPE)-COGNATE DNA SUBSTRATE COMPLEXX-ray diffraction1.752007-06-05
93Q8K|1|EDNA (5'-D(P*TP*GP*AP*GP*GP*CP*AP*GP*AP*GP*T)-3')Crystal Structure of Human Flap Endonuclease FEN1 (WT) in complex with product 5'-flap DNA, SM3+, and K+X-ray diffraction2.20012011-04-27
103FC3|1|D5'-(*DTP*DAP*DCP*DGP*DTP*DCP*DGP*DAP*DGP*DTP*DC)-3', 5'-(*DCP*DTP*DCP*DGP*DAP*DCP*DGP*DTP*DAP*DGP*DA)-3'Crystal structure of the beta-beta-alpha-Me type II restriction endonuclease Hpy99IX-ray diffraction1.752009-03-31
111TEZ|1|I+ 1TEZ|1|J5'-D(*AP*TP*CP*GP*GP*CP*T*(TCP)P*CP*GP*C)-3', 5'-D(P*CP*GP*AP*AP*GP*CP*CP*GP*A)-3'COMPLEX BETWEEN DNA AND THE DNA PHOTOLYASE FROM ANACYSTIS NIDULANSX-ray diffraction1.82004-12-14
121TEZ|1|K+ 1TEZ|1|L5'-D(*AP*TP*CP*GP*GP*CP*T*(TCP)P*CP*GP*C)-3', 5'-D(P*CP*GP*AP*AP*GP*CP*CP*GP*A)-3'COMPLEX BETWEEN DNA AND THE DNA PHOTOLYASE FROM ANACYSTIS NIDULANSX-ray diffraction1.82004-12-14
133PNC|1|C+ 3PNC|1|B+ 3PNC|1|D5'-D(*CP*AP*GP*TP*AP*G)-3', 5'-D(*CP*GP*GP*CP*CP*TP*TP*AP*CP*TP*G)-3', 5'-D(*GP*CP*CP*G)-3'Ternary crystal structure of a polymerase lambda variant with a GT mispair at the primer terminus and sodium at catalytic metal siteX-ray diffraction22011-02-02
142X6V|1|C+ 2X6V|1|D5'-D(*TP*CP*TP*CP*AP*CP*AP*CP*CP*TP*TP)-3', 5'-D(*TP*AP*AP*GP*GP*TP*GP*TP*GP*AP*GP)-3'synthetic constructCrystal structure of human TBX5 in the DNA-bound and DNA-free formX-ray diffraction2.22010-04-28
151ORN|1|B+ 1ORN|1|C5'-D(*AP*AP*GP*AP*CP*GP*TP*GP*GP*AP*C)-3', 5'-D(*T*GP*TP*CP*CP*AP*(PED)P*GP*TP*CP*T)-3'Structure of a Trapped Endonuclease III-DNA Covalent Intermediate: Estranged-Guanine ComplexX-ray diffraction1.72003-07-15
162PFN|1|T+ 2PFN|1|P+ 2PFN|1|DDownstream Primer, Primer, TemplateNa in the active site of DNA Polymerase lambdaX-ray diffraction1.92007-05-15
172PFO|1|T+ 2PFO|1|P+ 2PFO|1|DDownstream Primer, Primer, TemplateDNA Polymerase lambda in complex with DNA and dUPNPPX-ray diffraction22007-05-15
182XSD|1|A+ 2XSD|1|B5'-D(*AP*TP*GP*CP*AP*TP*GP*AP*GP*GP*AP)-3', 5'-D(*CP*CP*TP*CP*AP*TP*GP*CP*AP*TP*AP)-3'Crystal Structure of the dimeric Oct-6 (Pou3f1) POU domain bound to palindromic MORE DNAX-ray diffraction2.0492010-10-20
192PFP|1|T+ 2PFP|1|P+ 2PFP|1|DDownstream Primer, Primer, TemplateDNA Polymerase lambda in complex with DNA and dCTPX-ray diffraction2.12007-05-15
201XSN|1|T+ 1XSN|1|P+ 1XSN|1|D5'-D(P*GP*CP*CP*G)-3', 5'-D(*CP*AP*GP*TP*AP*(2DT))-3', 5'-D(*CP*GP*GP*CP*AP*AP*TP*AP*CP*TP*G)-3'Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gap and ddTTPX-ray diffraction1.952005-01-18
213PMN|1|B+ 3PMN|1|C+ 3PMN|1|D5'-D(*CP*GP*GP*CP*CP*TP*TP*AP*CP*TP*G)-3', 5'-D(*CP*AP*GP*TP*AP*G)-3', 5'-D(*GP*CP*CP*G)-3'ternary crystal structure of polymerase lambda variant with a GT mispair at the primer terminus with Mn2+ in the active siteX-ray diffraction2.22011-02-02
223C5G|1|T+ 3C5G|1|P+ 3C5G|1|DDNA (5'-D(*DCP*DGP*DGP*DCP*DAP*DAP*DTP*DAP*DCP*DTP*DG)-3'), DNA (5'-D(*DCP*DAP*DGP*DTP*DAP*(2DT))-3'), DNA (5'-D(P*DGP*DCP*DCP*DG)-3')Structure of a ternary complex of the R517K Pol lambda mutantX-ray diffraction2.22008-07-29
231XSP|1|T+ 1XSP|1|P+ 1XSP|1|D5'-D(P*GP*CP*CP*G)-3', 5'-D(*CP*AP*GP*TP*AP*CP*G)-3', 5'-D(*CP*GP*GP*CP*CP*GP*TP*AP*CP*TP*G)-3'Crystal Structure of human DNA polymerase lambda in complex with nicked DNA and pyrophosphateX-ray diffraction2.22005-01-18
243C5G|1|U+ 3C5G|1|Q+ 3C5G|1|EDNA (5'-D(*DCP*DGP*DGP*DCP*DAP*DAP*DTP*DAP*DCP*DTP*DG)-3'), DNA (5'-D(*DCP*DAP*DGP*DTP*DAP*(2DT))-3'), DNA (5'-D(P*DGP*DCP*DCP*DG)-3')Structure of a ternary complex of the R517K Pol lambda mutantX-ray diffraction2.22008-07-29
251RZT|1|B+ 1RZT|1|C+ 1RZT|1|D5'-D(*CP*GP*GP*CP*AP*AP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*G)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA moleculeX-ray diffraction2.12004-03-02
262P0J|1|C+ 2P0J|1|D5'-D(*AP*TP*GP*AP*AP*TP*CP*CP*AP*TP*A)-3', 5'-D(*TP*AP*TP*GP*GP*AP*TP*TP*CP*AP*T)-3'Structure of restriction endonuclease BstYI bound to non-cognate DNAX-ray diffraction2.12007-05-01
271RZT|1|F+ 1RZT|1|G+ 1RZT|1|H5'-D(*CP*GP*GP*CP*AP*AP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*G)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA moleculeX-ray diffraction2.12004-03-02
281RZT|1|J+ 1RZT|1|K+ 1RZT|1|L5'-D(*CP*GP*GP*CP*AP*AP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*G)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA moleculeX-ray diffraction2.12004-03-02
291RZT|1|N+ 1RZT|1|O+ 1RZT|1|P5'-D(*CP*GP*GP*CP*AP*AP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*G)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA moleculeX-ray diffraction2.12004-03-02
303Q8P|1|TDNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3')synthetic constructHuman DNA polymerase iota incorporating dCTP opposite 8-oxo-guanineX-ray diffraction1.952011-02-23
313MQY|1|D+ 3MQY|1|F+ 3MQY|1|C+ 3MQY|1|EDNA (5'-D(P*CP*CP*GP*GP*TP*GP*GP*AP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*TP*CP*CP*A)-3')SgrAI with cleaved DNA and Magnesium boundX-ray diffraction22010-11-24
323Q8Q|1|TDNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3')synthetic constructHuman DNA polymerase iota incorporating dATP opposite 8-oxo-guanineX-ray diffraction2.0312011-02-23
333MDA|1|T+ 3MDA|1|P+ 3MDA|1|DDNA (5'-D(P*GP*CP*CP*G)-3'), DNA (5'-D(*CP*AP*GP*TP*AP*CP*(CAR))-3'), DNA (5'-D(*CP*GP*GP*CP*GP*GP*TP*AP*CP*TP*G)-3')DNA polymerase lambda in complex with araCX-ray diffraction2.0312010-04-28
342W36|1|C+ 2W36|1|D5'-D(*GP*CP*BRUP*AP*CP*IP*GP*AP*BRUP*CP*GP)-3', 5'-D(*CP*GP*AP*TP*CP*TP*GP*TP*AP*GP*CP)-3'synthetic constructStructures of endonuclease V with DNA reveal initiation of deaminated adenine repairX-ray diffraction2.12009-01-20
353G6Y|1|T+ 3G6Y|1|PTemplate DNA strand, Primer DNA strandTernary complex of DNA Polymerase iota:DNA:dTTP with an abasic site at the templating positionX-ray diffraction2.12009-05-12
361XSL|1|B+ 1XSL|1|C+ 1XSL|1|D5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*C)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gapX-ray diffraction2.32005-01-18
371XSL|1|F+ 1XSL|1|G+ 1XSL|1|H5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*C)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gapX-ray diffraction2.32005-01-18
381XSL|1|J+ 1XSL|1|K+ 1XSL|1|L5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*C)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gapX-ray diffraction2.32005-01-18
391XSL|1|N+ 1XSL|1|O+ 1XSL|1|P5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*C)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gapX-ray diffraction2.32005-01-18
403MDC|1|T+ 3MDC|1|P+ 3MDC|1|DDNA (5'-D(P*GP*CP*CP*G)-3'), DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(*CP*GP*GP*CP*GP*GP*TP*AP*CP*TP*G)-3')DNA polymerase lambda in complex with dFdCTPX-ray diffraction1.9992010-04-28
413C5F|1|T+ 3C5F|1|P+ 3C5F|1|DDNA (5'-D(*DCP*DGP*DGP*DCP*DCP*DGP*DTP*DAP*DCP*DTP*DG)-3'), DNA (5'-D(*DCP*DAP*DGP*DTP*DAP*DC)-3'), DNA (5'-D(P*DGP*DCP*DCP*DG)-3')Structure of a binary complex of the R517A Pol lambda mutantX-ray diffraction2.252008-09-02
423C5F|1|U+ 3C5F|1|Q+ 3C5F|1|EDNA (5'-D(*DCP*DGP*DGP*DCP*DCP*DGP*DTP*DAP*DCP*DTP*DG)-3'), DNA (5'-D(*DCP*DAP*DGP*DTP*DAP*DC)-3'), DNA (5'-D(P*DGP*DCP*DCP*DG)-3')Structure of a binary complex of the R517A Pol lambda mutantX-ray diffraction2.252008-09-02
433Q8S|1|TDNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3')synthetic constructHuman DNA polymerase iota incorporating dTTP opposite 8-oxo-guanineX-ray diffraction2.092011-02-23
441ORP|1|B+ 1ORP|1|C5'-D(*AP*AP*GP*AP*CP*AP*TP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*AP*(PED)P*GP*TP*CP*T)-3'Structure of a Trapped Endonuclease III-DNA Covalent Intermediate: Estranged-Adenine ComplexX-ray diffraction2.22003-07-15
453KET|1|B+ 3KET|1|CDNA (5'-D(*AP*AP*TP*TP*GP*TP*GP*AP*AP*AP*T)-3'), DNA (5'-D(P*AP*TP*TP*TP*CP*AP*CP*AP*AP*TP*T)-3')synthetic constructCrystal structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae bound to a palindromic operatorX-ray diffraction2.42010-11-10
463MGH|1|E+ 3MGH|1|F+ 3MGH|1|GDNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*CP*CP*G)-3')Binary complex of a DNA polymerase lambda loop mutantX-ray diffraction2.42010-05-19
473MGH|1|T+ 3MGH|1|P+ 3MGH|1|DDNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*CP*CP*G)-3')Binary complex of a DNA polymerase lambda loop mutantX-ray diffraction2.42010-05-19
481RRQ|1|B+ 1RRQ|1|C5'-D(AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3', 5'-D(*TP*GP*TP*CP*CP*AP*AP*GP*TP*CP*T)-3'MutY adenine glycosylase in complex with DNA containing an A:oxoG pairX-ray diffraction2.222004-02-17
493GXQ|1|D+ 3GXQ|1|CDNA (5'-D(*AP*CP*AP*TP*GP*TP*CP*AP*TP*GP*T)-3'), DNA (5'-D(*AP*CP*AP*TP*GP*AP*CP*AP*TP*G)-3')Structure of ArtA and DNA complexX-ray diffraction2.352009-10-13
503G6X|1|T+ 3G6X|1|PTemplate DNA strand, Primer DNA strandTernary complex of DNA Polymerase iota:DNA:dGTP with an abasic site at the templating positionX-ray diffraction2.082009-05-12
513Q8R|1|TDNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3')synthetic constructHuman DNA polymerase iota incorporating dGTP opposite 8-oxo-guanineX-ray diffraction2.452011-02-23
522Z3X|1|D+ 2Z3X|1|E5'-D(*GP*GP*GP*GP*GP*GP*GP*GP*GP*GP*A)-3', 5'-D(*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*A)-3'synthetic constructStructure of a Protein-DNA Complex Essential for DNA Protection in Spore of Bacillus SpeciesX-ray diffraction2.12008-02-12
532PFQ|1|T+ 2PFQ|1|P+ 2PFQ|1|DDownstream Primer, Primer, TemplateManganese promotes catalysis in a DNA polymerase lambda-DNA crystalX-ray diffraction2.12007-05-15
541P59|1|B+ 1P59|1|C5'-D(*AP*AP*GP*AP*CP*GP*(5IU)P*GP*GP*AP*C)-3', 5'-D(TP*GP*(5IU)P*CP*CP*AP*(3DR)P*GP*(5IU)P*CP*T)-3'Structure of a non-covalent Endonuclease III-DNA ComplexX-ray diffraction2.52003-07-15
552XGP|1|T+ 2XGP|1|P5'-D(*CP*8FG*CP*TP*CP*AP*TP*CP*CP*AP*C)-3', 5'-D(*GP*TP*GP*GP*AP*TP*GP*AP*G)-3'Yeast DNA polymerase eta in complex with C8-2-acetylaminofluorene containing DNAX-ray diffraction2.72010-11-03
562XGP|1|U+ 2XGP|1|Q5'-D(*CP*8FG*CP*TP*CP*AP*TP*CP*CP*AP*C)-3', 5'-D(*GP*TP*GP*GP*AP*TP*GP*AP*G)-3'Yeast DNA polymerase eta in complex with C8-2-acetylaminofluorene containing DNAX-ray diffraction2.72010-11-03
572R9L|1|D+ 2R9L|1|F+ 2R9L|1|C+ 2R9L|1|EDNA (5'-D(*DGP*DCP*DCP*DGP*DCP*DAP*DAP*DCP*DGP*DCP*DA)-3'), DNA (5'-D(*DGP*DCP*DCP*DGP*DCP*DAP*DAP*DCP*DGP*DCP*DAP*DCP*DG)-3'), DNA (5'-D(P*DGP*DCP*DGP*DGP*DC)-3')synthetic constructPolymerase Domain from Mycobacterium tuberculosis Ligase D in complex with DNAX-ray diffraction2.42008-01-08
582IHM|1|T+ 2IHM|1|P+ 2IHM|1|D5'-D(*CP*GP*GP*CP*AP*AP*TP*AP*CP*TP*G)-3', 5'-D(*CP*AP*GP*TP*AP*T)-3', 5'-D(P*GP*CP*CP*G)-3'Polymerase mu in ternary complex with gapped 11mer DNA duplex and bound incoming nucleotideX-ray diffraction2.42006-12-12
592FLP|1|T+ 2FLP|1|PDNA template strand, DNA primer strandBinary complex of the catalytic core of human DNA polymerase iota with DNA (template G)X-ray diffraction2.42006-12-05
602IHM|1|U+ 2IHM|1|Q+ 2IHM|1|E5'-D(*CP*GP*GP*CP*AP*AP*TP*AP*CP*TP*G)-3', 5'-D(*CP*AP*GP*TP*AP*T)-3', 5'-D(P*GP*CP*CP*G)-3'Polymerase mu in ternary complex with gapped 11mer DNA duplex and bound incoming nucleotideX-ray diffraction2.42006-12-12
613PML|1|C+ 3PML|1|H+ 3PML|1|D5'-D(*CP*GP*GP*CP*TP*GP*TP*AP*CP*TP*G)-3', 5'-D(*CP*AP*GP*TP*AP*C)-3', 5'-D(P*GP*CP*CP*G)-3'crystal structure of a polymerase lambda variant with a dGTP analog opposite a templating TX-ray diffraction2.62011-01-26
623PML|1|E+ 3PML|1|F+ 3PML|1|G5'-D(*CP*GP*GP*CP*TP*GP*TP*AP*CP*TP*G)-3', 5'-D(*CP*AP*GP*TP*AP*C)-3', 5'-D(P*GP*CP*CP*G)-3'crystal structure of a polymerase lambda variant with a dGTP analog opposite a templating TX-ray diffraction2.62011-01-26
633MGI|1|T+ 3MGI|1|P+ 3MGI|1|DDNA (5'-D(P*GP*CP*CP*G)-3'), DNA (5'-D(*CP*AP*GP*TP*AP*T)-3'), DNATernary complex of a DNA polymerase lambda loop mutantX-ray diffraction2.6032010-05-19
642XO7|1|C+ 2XO7|1|B5'-D(*AP*GP*GP*AP*AP*TP*GP*GP*TP*CP*A)-3', 5'-D(*GP*AP*CP*CP*AP*TP*47C*CP*CP*T)-3'synthetic constructCrystal structure of a dA:O-allylhydroxylamine-dC basepair in complex with fragment DNA polymerase I from Bacillus stearothermophilusX-ray diffraction2.852010-09-15
652FLN|1|T+ 2FLN|1|PDNA template strand, DNA primer strandbinary complex of catalytic core of human DNA polymerase iota with DNA (template A)X-ray diffraction2.52006-12-05
662XGQ|1|T+ 2XGQ|1|P5'-D(*CP*8AG*CP*TP*CP*AP*TP*CP*CP*AP*C)-3', 5'-D(*GP*TP*GP*GP*AP*TP*GP*AP*G)-3'Structure of yeast DNA polymerase eta in complex with C8-N-acetyl-2- aminoanthracene containing DNAX-ray diffraction2.72010-11-03
672XGQ|1|U+ 2XGQ|1|Q5'-D(*CP*8AG*CP*TP*CP*AP*TP*CP*CP*AP*C)-3', 5'-D(*GP*TP*GP*GP*AP*TP*GP*AP*G)-3'Structure of yeast DNA polymerase eta in complex with C8-N-acetyl-2- aminoanthracene containing DNAX-ray diffraction2.72010-11-03
681RRS|1|B+ 1RRS|1|C5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3', 5'-D(*TP*GP*TP*CP*CP*AP*(HPD)P*GP*TP*CP*T)-3'MutY adenine glycosylase in complex with DNA containing an abasic siteX-ray diffraction2.42004-02-17
692ZKF|1|C+ 2ZKF|1|DDNA (5'-D(P*DCP*DAP*DCP*DCP*DGP*DGP*DAP*DTP*DAP*DGP*DA)-3'), DNA (5'-D(*DCP*DTP*DAP*DTP*DCP*(5CM)P*DGP*DGP*DTP*DGP*DA)-3')Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNAX-ray diffraction2.552008-09-09
702R8J|1|T+ 2R8J|1|PDNA (5'-D(P*DGP*DGP*DCP*DTP*DCP*DAP*DTP*DCP*DCP*DAP*DC)-3'), DNA (5'-D(*DGP*DTP*DGP*DGP*DAP*DTP*DGP*DAP*DG)-3')Structure of the Eukaryotic DNA Polymerase eta in complex with 1,2-d(GpG)-cisplatin containing DNAX-ray diffraction3.12007-12-11
712R8J|1|U+ 2R8J|1|QDNA (5'-D(P*DGP*DGP*DCP*DTP*DCP*DAP*DTP*DCP*DCP*DAP*DC)-3'), DNA (5'-D(*DGP*DTP*DGP*DGP*DAP*DTP*DGP*DAP*DG)-3')Structure of the Eukaryotic DNA Polymerase eta in complex with 1,2-d(GpG)-cisplatin containing DNAX-ray diffraction3.12007-12-11
723Q0F|1|B+ 3Q0F|1|CDNA (5'-D(*CP*TP*GP*AP*GP*GP*AP*GP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*CP*TP*(5CM)P*CP*TP*CP*AP*G)-3')Crystal structure of SUVH5 SRA- methylated CHH DNA complexX-ray diffraction2.752011-02-02
732GE5|1|C+ 2GE5|1|D5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3'EcoRV Restriction Endonuclease C-terminal deletion mutant/GATATC/Ca2+X-ray diffraction2.42006-07-04
742FLL|1|T+ 2FLL|1|PDNA template strand, DNA primer strandTernary complex of human DNA polymerase iota with DNA and dTTPX-ray diffraction2.62006-12-12
753OH9|1|B+ 3OH9|1|C5'-D(*GP*GP*CP*AP*TP*TP*CP*AP*TP*GP*T)-3', 5'-D(*AP*CP*AP*(BRU)P*GP*AP*AP*(BRU)P*GP*CP*C)-3'AlkA Undamaged DNA Complex: Interrogation of a T:A base pairX-ray diffraction2.8022010-09-15
762H8C|1|W+ 2H8C|1|X5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*T)-3'Structure of RusA D70N in complex with DNAX-ray diffraction3.12007-04-24
772H8C|1|Y+ 2H8C|1|Z5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*T)-3'Structure of RusA D70N in complex with DNAX-ray diffraction3.12007-04-24
783Q0C|1|B+ 3Q0C|1|CDNA (5'-D(*AP*CP*TP*AP*(5CM)P*GP*TP*AP*GP*TP*T)-3')Crystal structure of SUVH5 SRA-fully methylated CG DNA complex in space group P6122X-ray diffraction2.65672011-02-02
792Y35|1|BDT11 (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP)-3'synthetic constructCrystal structure of Xrn1-substrate complexX-ray diffraction3.22011-03-16
803NM9|1|B+ 3NM9|1|CDNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3'HMGD(M13A)-DNA complexX-ray diffraction2.852010-09-22
813NM9|1|E+ 3NM9|1|FDNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3'HMGD(M13A)-DNA complexX-ray diffraction2.852010-09-22
823NM9|1|H+ 3NM9|1|IDNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3'HMGD(M13A)-DNA complexX-ray diffraction2.852010-09-22
833NM9|1|K+ 3NM9|1|LDNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3'HMGD(M13A)-DNA complexX-ray diffraction2.852010-09-22
843NM9|1|N+ 3NM9|1|ODNA 5'-D(*G*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3'HMGD(M13A)-DNA complexX-ray diffraction2.852010-09-22
852DPU|1|E+ 2DPU|1|D5'-D(*CP*TP*AP*TP*GP*AP*AP*CP*AP*TP*T)-3', 5'-D(P*AP*TP*GP*TP*TP*CP*AP*TP*AP*G)-3'Crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNAX-ray diffraction3.12007-05-15
862C9N|1|A+ 2C9N|1|B5'-D(*CP*AP*CP*TP*GP*AP*CP*TP*CP*AP *T)-3', 5'-D(*CP*AP*TP*GP*AP*GP*TP*CP*AP*GP *T)-3'Human gammaherpesvirus 4Structure of the Epstein-Barr virus ZEBRA protein at approximately 3. 5 Angstrom resolutionX-ray diffraction3.32006-02-21
871AAY|1|B+ 1AAY|1|CDNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3')ZIF268 ZINC FINGER-DNA COMPLEXX-ray diffraction1.61997-04-21
881A1H|1|B+ 1A1H|1|CDNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3')QGSR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)X-ray diffraction1.61998-06-10
891A1I|1|B+ 1A1I|1|CDNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3')RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)X-ray diffraction1.61998-06-17
901EON|1|C+ 1EON|1|DDNA (5'-D(*AP*AP*AP*GP*AP*(TSP)P*AP*TP*CP*TP*T)-3'), DNA (5'-D(*CP*AP*AP*GP*AP*(TSP)P*AP*TP*CP*TP*T)-3')ECORV BOUND TO 3'-S-PHOSPHOROTHIOLATE DNA AND CA2+X-ray diffraction1.62000-04-04
911JK2|1|B+ 1JK2|1|C5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*CP*CP*CP*AP*CP*GP*C)-3'Zif268 D20A mutant bound to the GCT DNA siteX-ray diffraction1.652001-10-19
921SUZ|1|C+ 1SUZ|1|D5'-D(*C*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3'The structure of K92A EcoRV bound to cognate DNA and Mg2+X-ray diffraction1.82004-04-06
931E3O|1|A+ 1E3O|1|B5'-D(*AP*TP*GP*CP*AP*TP*GP*AP*GP*GP*A)-3', 5'-D(*TP*CP*CP*TP*CP*AP*TP*GP*CP*AP*T)-3'Homo sapiensCrystal structure of Oct-1 POU dimer bound to MOREX-ray diffraction1.92001-11-10
941A1K|1|B+ 1A1K|1|CDNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*AP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*TP*CP*CP*CP*AP*CP*GP*C)-3')RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)X-ray diffraction1.91998-06-10
951JK1|1|B+ 1JK1|1|C5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*G)-3', 5'-D(*TP*CP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3'Zif268 D20A Mutant Bound to WT DNA SiteX-ray diffraction1.92001-10-19
961A1G|1|B+ 1A1G|1|CDNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3')DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)X-ray diffraction1.91998-06-10
971SSP|1|B+ 1SSP|1|A5'-D(*AP*AP*AP*GP*AP*TP*AP*AP*CP*AP*G)-3', 5'-D(*CP*TP*GP*TP*(D1P)P*AP*TP*CP*TP*T)-3'WILD-TYPE URACIL-DNA GLYCOSYLASE BOUND TO URACIL-CONTAINING DNAX-ray diffraction1.91999-05-06
981B94|1|C+ 1B94|1|DDNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3')RESTRICTION ENDONUCLEASE ECORV WITH CALCIUMX-ray diffraction1.91999-02-26
992B0E|1|C+ 2B0E|1|D5'-D(*AP*AP*AP*GP*AP*AP*(DU)P*TP*CP*TP*T)-3'EcoRV Restriction Endonuclease/GAAUTC/Ca2+X-ray diffraction1.92005-09-27
1001B97|1|C+ 1B97|1|DDNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3')ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUPX-ray diffraction1.91999-02-26
1011A1J|1|B+ 1A1J|1|CDNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3')RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)X-ray diffraction21998-06-17
1021RVA|1|C+ 1RVA|1|DDNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3')MG2+ BINDING TO THE ACTIVE SITE OF ECO RV ENDONUCLEASE: A CRYSTALLOGRAPHIC STUDY OF COMPLEXES WITH SUBSTRATE AND PRODUCT DNA AT 2 ANGSTROMS RESOLUTIONX-ray diffraction21995-01-26
1032B0D|1|C+ 2B0D|1|D5'-D(*AP*AP*AP*GP*AP*AP*TP*TP*CP*TP*T)-3'EcoRV Restriction Endonuclease/GAATTC/Ca2+X-ray diffraction22005-09-27
1041EO3|1|C+ 1EO3|1|DDNA (5'-D(*CP*AP*AP*GP*AP*(TSP)P*AP*TP*CP*TP*T)-3')INHIBITION OF ECORV ENDONUCLEASE BY DEOXYRIBO-3'-S-PHOSPHOROTHIOLATES: A HIGH RESOLUTION X-RAY CRYSTALLOGRAPHIC STUDYX-ray diffraction22000-04-04
1051AZ0|1|C+ 1AZ0|1|DDNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3')ECORV ENDONUCLEASE/DNA COMPLEXX-ray diffraction21998-06-19
1061BGB|1|C+ 1BGB|1|DDNA (5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*C)-3')ECORV ENDONUCLEASE COMPLEX WITH 5'-CGGGATATCCC DNAX-ray diffraction21998-10-28
1071BSU|1|D+ 1BSU|1|CDNA (5'-D(*AP*AP*AP*GP*AP*(5CM)P*IP*TP*CP*TP*T)-3'), DNA (5'-D(P*AP*AP*GP*AP*(5CM)P*IP*TP*CP*TP*T)-3')STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASEX-ray diffraction21998-09-09
1081BC7|1|A+ 1BC7|1|BDNA (5'-D(*GP*AP*CP*AP*GP*GP*AP*TP*GP*TP*G)-3'), DNA (5'-D(*CP*AP*CP*AP*TP*CP*CP*TP*GP*TP*C)-3')SERUM RESPONSE FACTOR ACCESSORY PROTEIN 1A (SAP-1)/DNA COMPLEXX-ray diffraction2.011999-01-21
1091B95|1|C+ 1B95|1|DDNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3')ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUPX-ray diffraction2.051999-02-26
1101ZAA|1|A+ 1ZAA|1|BDNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3')ZINC FINGER-DNA RECOGNITION: CRYSTAL STRUCTURE OF A ZIF268-DNA COMPLEX AT 2.1 ANGSTROMSX-ray diffraction2.11993-10-31
1111A1F|1|B+ 1A1F|1|CDNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*AP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*TP*CP*CP*CP*AP*CP*GP*C)-3')DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)X-ray diffraction2.11998-06-10
1121A3Q|1|C+ 1A3Q|1|DDNA (5'-D(*GP*GP*GP*GP*AP*AP*TP*CP*CP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*GP*AP*TP*TP*CP*CP*CP*C)-3')HUMAN NF-KAPPA-B P52 BOUND TO DNAX-ray diffraction2.11998-06-11
1131RV5|1|C+ 1RV5|1|D5'-D(*AP*AP*AP*GP*AP*T*AP*TP*CP*TP*T)-3'COMPLEX OF ECORV ENDONUCLEASE WITH D(AAAGAT)/D(ATCTT)X-ray diffraction2.11998-11-11
1141RVB|1|C+ 1RVB|1|DDNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3')MG2+ BINDING TO THE ACTIVE SITE OF ECO RV ENDONUCLEASE: A CRYSTALLOGRAPHIC STUDY OF COMPLEXES WITH SUBSTRATE AND PRODUCT DNA AT 2 ANGSTROMS RESOLUTIONX-ray diffraction2.11995-01-26
1151BUA|1|C+ 1BUA|1|DDNA (5'-D(*AP*AP*AP*GP*AP*CP*IP*TP*CP*TP*T)-3')STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASEX-ray diffraction2.151998-09-09
1161SX8|1|C+ 1SX8|1|D5'-D(*C*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3'EcoRV bound to cognate DNA and Mn2+X-ray diffraction2.152004-04-06
1171BSS|1|C+ 1BSS|1|D5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3'ECORV-T93A/DNA/CA2+X-ray diffraction2.151998-09-02
1183G0Q|1|B+ 3G0Q|1|C5'-D(*AP*AP*GP*AP*CP*(8OG)P*GP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*CP*AP*GP*TP*CP*TP*T)-3'Crystal Structure of MutY bound to its inhibitor DNAX-ray diffraction2.22009-11-17
1192SSP|1|B+ 2SSP|1|ADNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*AP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*TP*(AAB)P*AP*TP*CP*TP*T)-3')LEUCINE-272-ALANINE URACIL-DNA GLYCOSYLASE BOUND TO ABASIC SITE-CONTAINING DNAX-ray diffraction2.251999-05-06
1201A1L|1|B+ 1A1L|1|CDNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3')ZIF268 ZINC FINGER-DNA COMPLEX (GCAC SITE)X-ray diffraction2.31998-06-17
1211B96|1|C+ 1B96|1|DDNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3')ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUPX-ray diffraction2.31999-02-26
1221NFK|1|C+ 1NFK|1|DDNA (5'-D(*TP*GP*GP*GP*AP*AP*TP*TP*CP*CP*C)-3')STRUCTURE OF THE NUCLEAR FACTOR KAPPA-B (NF-KB) P50 HOMODIMERX-ray diffraction2.31996-12-23
1231KU7|1|B+ 1KU7|1|C5'-D(*CP*CP*TP*TP*GP*AP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*TP*TP*TP*GP*TP*CP*AP*AP*G)-3'Crystal Structure of Thermus aquatics RNA Polymerase SigmaA Subunit Region 4 Bound to-35 Element DNAX-ray diffraction2.42002-03-29
1242GWS|1|F+ 2GWS|1|G+ 2GWS|1|H5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*G)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminusX-ray diffraction2.42006-09-05
1252GWS|1|J+ 2GWS|1|K+ 2GWS|1|L5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*G)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminusX-ray diffraction2.42006-09-05
1262GWS|1|N+ 2GWS|1|R+ 2GWS|1|Q5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*G)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminusX-ray diffraction2.42006-09-05
1272GWS|1|T+ 2GWS|1|P+ 2GWS|1|D5'-D(*CP*GP*GP*CP*AP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*G)-3', 5'-D(P*GP*CP*CP*G)-3'Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminusX-ray diffraction2.42006-09-05
1283L1Q|1|A+ 3L1Q|1|B5'-D(*TP*GP*GP*CP*CP*TP*TP*AP*AP*GP*G)-3'The crystal structure of the undecamer d(TGGCCTTAAGG)X-ray diffraction2.52010-10-27
1291VRL|1|B+ 1VRL|1|C5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3', 5'-D(*TP*GP*TP*CP*CP*AP*(HPD)P*GP*TP*CP*T)-3'MutY adenine glycosylase in complex with DNA and soaked adenine free baseX-ray diffraction2.52005-03-22
1301HUZ|1|C+ 1HUZ|1|D5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3', 5'-D(P*CP*GP*AP*CP*GP*CP*CP*T)-3'CRYSTAL STRUCTURE OF DNA POLYMERASE COMPLEXED WITH DNA AND CR-PCPX-ray diffraction2.62001-04-23
1311HUO|1|C+ 1HUO|1|D5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3', 5'-D(P*CP*GP*AP*CP*GP*CP*C)-3'CRYSTAL STRUCTURE OF DNA POLYMERASE BETA COMPLEXED WITH DNA AND CR-TMPPCPX-ray diffraction2.62001-04-23
1321HUZ|1|T+ 1HUZ|1|P5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3', 5'-D(P*CP*GP*AP*CP*GP*CP*CP*T)-3'CRYSTAL STRUCTURE OF DNA POLYMERASE COMPLEXED WITH DNA AND CR-PCPX-ray diffraction2.62001-04-23
1331HUO|1|T+ 1HUO|1|P5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3', 5'-D(P*CP*GP*AP*CP*GP*CP*C)-3'CRYSTAL STRUCTURE OF DNA POLYMERASE BETA COMPLEXED WITH DNA AND CR-TMPPCPX-ray diffraction2.62001-04-23
1341HLO|1|C+ 1HLO|1|DDNA (5'-D(*CP*AP*CP*CP*AP*CP*GP*TP*GP*GP*T)-3'), DNA (5'-D(*AP*CP*CP*AP*CP*GP*TP*GP*GP*TP*G)-3')THE CRYSTAL STRUCTURE OF AN INTACT HUMAN MAX-DNA COMPLEX: NEW INSIGHTS INTO MECHANISMS OF TRANSCRIPTIONAL CONTROLX-ray diffraction2.81997-10-27
1351DE8|1|U+ 1DE8|1|VDNA (5'-D(*GP*CP*TP*AP*CP*(3DR)P*GP*AP*TP*CP*G)-3'), DNA (5'-D(*CP*GP*AP*TP*CP*GP*GP*TP*AP*GP*C)-3')HUMAN APURINIC/APYRIMIDINIC ENDONUCLEASE-1 (APE1) BOUND TO ABASIC DNAX-ray diffraction2.952000-02-02
1361DE8|1|X+ 1DE8|1|YDNA (5'-D(*GP*CP*TP*AP*CP*(3DR)P*GP*AP*TP*CP*G)-3'), DNA (5'-D(*CP*GP*AP*TP*CP*GP*GP*TP*AP*GP*C)-3')HUMAN APURINIC/APYRIMIDINIC ENDONUCLEASE-1 (APE1) BOUND TO ABASIC DNAX-ray diffraction2.952000-02-02
1371D0E|1|E+ 1D0E|1|F5'-D(*TP*TP*TP*CP*AP*TP*GP*CP*AP*TP*G)-3'CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAINX-ray diffraction32000-04-04
1382V2T|1|C+ 2V2T|1|D5'-D(*CP*GP*GP*GP*AP*AP*TP*TP*CP*CP*CP)-3'X-ray structure of a NF-kB p50-RelB-DNA complexX-ray diffraction3.052007-07-03
1393DO7|1|C+ 3DO7|1|D5'-D(*DCP*DGP*DGP*DGP*DAP*DAP*DTP*DTP*DCP*DCP*DC)-3'X-ray structure of a NF-kB p52/RelB/DNA complexX-ray diffraction3.052009-07-21
1403DO7|1|E5'-D(*DCP*DGP*DGP*DGP*DAP*DAP*DTP*DTP*DCP*DCP*DC)-3'X-ray structure of a NF-kB p52/RelB/DNA complexX-ray diffraction3.052009-07-21

Release history

Release0.150.160.17
Date2011-04-302011-05-072011-05-14

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLengthNAKB_NA_annotationNAKB_protein_annotation
1
1D0E|1|E+1D0E|1|F
CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAINX-RAY DIFFRACTION311enzyme,polymerase,transferase
2
2NQ9|1|D+2NQ9|1|B+2NQ9|1|C
High resolution crystal structure of Escherichia coli endonuclease IV (Endo IV) Y72A mutant bound to damaged DNAX-RAY DIFFRACTION1.4511enzyme,hydrolase,nuclease
3
3FC3|1|D
Crystal structure of the beta-beta-alpha-Me type II restriction endonuclease Hpy99IX-RAY DIFFRACTION1.7511B-form double helix,double helix,structureenzyme,hydrolase,nuclease
4
3GOX|1|C+3GOX|1|D
Crystal structure of the beta-beta-alpha-Me type II restriction endonuclease Hpy99I in the absence of EDTAX-RAY DIFFRACTION1.511B-form double helix,double helix,structureenzyme,hydrolase,nuclease
5
3Q0F|1|B+3Q0F|1|C
Crystal structure of SUVH5 SRA- methylated CHH DNA complexX-RAY DIFFRACTION2.7511double helix,structureenzyme,methylase,transferase
6
1DE8|1|X+1DE8|1|Y
HUMAN APURINIC/APYRIMIDINIC ENDONUCLEASE-1 (APE1) BOUND TO ABASIC DNAX-RAY DIFFRACTION2.9511B-form double helix,double helix,structureenzyme,hydrolase,lyase,nuclease
7
1DE8|1|U+1DE8|1|V
HUMAN APURINIC/APYRIMIDINIC ENDONUCLEASE-1 (APE1) BOUND TO ABASIC DNAX-RAY DIFFRACTION2.9511B-form double helix,double helix,structureenzyme,hydrolase,lyase,nuclease
8
3Q0C|1|B+3Q0C|1|C
Crystal structure of SUVH5 SRA-fully methylated CG DNA complex in space group P6122X-RAY DIFFRACTION2.656711enzyme,methylase,transferase
9
2Y35|1|B
Crystal structure of Xrn1-substrate complexX-RAY DIFFRACTION3.24enzyme,hydrolase,nuclease
10
2R9L|1|D+2R9L|1|F+2R9L|1|C+2R9L|1|E
Polymerase Domain from Mycobacterium tuberculosis Ligase D in complex with DNAX-RAY DIFFRACTION2.411B-form double helix,double helix,structureenzyme,ligase
11
2GWS|1|F+2GWS|1|G+2GWS|1|H
Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminusX-RAY DIFFRACTION2.411enzyme,polymerase,transferase
12
2GWS|1|J+2GWS|1|K+2GWS|1|L
Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminusX-RAY DIFFRACTION2.411enzyme,polymerase,transferase
13
2GWS|1|N+2GWS|1|R+2GWS|1|Q
Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminusX-RAY DIFFRACTION2.411enzyme,polymerase,transferase
14
2GWS|1|T+2GWS|1|P+2GWS|1|D
Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminusX-RAY DIFFRACTION2.411enzyme,polymerase,transferase
15
2IHM|1|U+2IHM|1|Q+2IHM|1|E
Polymerase mu in ternary complex with gapped 11mer DNA duplex and bound incoming nucleotideX-RAY DIFFRACTION2.411enzyme,polymerase,transferase
16
2IHM|1|T+2IHM|1|P+2IHM|1|D
Polymerase mu in ternary complex with gapped 11mer DNA duplex and bound incoming nucleotideX-RAY DIFFRACTION2.411enzyme,polymerase,transferase
17
3C5F|1|T+3C5F|1|P+3C5F|1|D
Structure of a binary complex of the R517A Pol lambda mutantX-RAY DIFFRACTION2.2511enzyme,polymerase,transferase
18
3C5F|1|U+3C5F|1|Q+3C5F|1|E
Structure of a binary complex of the R517A Pol lambda mutantX-RAY DIFFRACTION2.2511enzyme,polymerase,transferase
19
2PFQ|1|T+2PFQ|1|P+2PFQ|1|D
Manganese promotes catalysis in a DNA polymerase lambda-DNA crystalX-RAY DIFFRACTION2.111enzyme,polymerase,transferase
20
1XSP|1|T+1XSP|1|P+1XSP|1|D
Crystal Structure of human DNA polymerase lambda in complex with nicked DNA and pyrophosphateX-RAY DIFFRACTION2.211enzyme,polymerase,transferase
21
2PFP|1|T+2PFP|1|P+2PFP|1|D
DNA Polymerase lambda in complex with DNA and dCTPX-RAY DIFFRACTION2.111enzyme,polymerase,transferase
22
3MDA|1|T+3MDA|1|P+3MDA|1|D
DNA polymerase lambda in complex with araCX-RAY DIFFRACTION2.03111enzyme,polymerase,transferase
23
2PFO|1|T+2PFO|1|P+2PFO|1|D
DNA Polymerase lambda in complex with DNA and dUPNPPX-RAY DIFFRACTION211enzyme,polymerase,transferase
24
1XSN|1|T+1XSN|1|P+1XSN|1|D
Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gap and ddTTPX-RAY DIFFRACTION1.9511enzyme,polymerase,transferase
25
3MGI|1|T+3MGI|1|P+3MGI|1|D
Ternary complex of a DNA polymerase lambda loop mutantX-RAY DIFFRACTION2.60311enzyme,polymerase,transferase
26
3PNC|1|C+3PNC|1|B+3PNC|1|D
Ternary crystal structure of a polymerase lambda variant with a GT mispair at the primer terminus and sodium at catalytic metal siteX-RAY DIFFRACTION211enzyme,polymerase,transferase
27
3PMN|1|B+3PMN|1|C+3PMN|1|D
ternary crystal structure of polymerase lambda variant with a GT mispair at the primer terminus with Mn2+ in the active siteX-RAY DIFFRACTION2.211enzyme,polymerase,transferase
28
2PFN|1|T+2PFN|1|P+2PFN|1|D
Na in the active site of DNA Polymerase lambdaX-RAY DIFFRACTION1.911enzyme,polymerase,transferase
29
3MDC|1|T+3MDC|1|P+3MDC|1|D
DNA polymerase lambda in complex with dFdCTPX-RAY DIFFRACTION1.99911enzyme,polymerase,transferase
30
3C5G|1|U+3C5G|1|Q+3C5G|1|E
Structure of a ternary complex of the R517K Pol lambda mutantX-RAY DIFFRACTION2.211enzyme,polymerase,transferase
31
3C5G|1|T+3C5G|1|P+3C5G|1|D
Structure of a ternary complex of the R517K Pol lambda mutantX-RAY DIFFRACTION2.211enzyme,polymerase,transferase
32
3PML|1|C+3PML|1|H+3PML|1|D
crystal structure of a polymerase lambda variant with a dGTP analog opposite a templating TX-RAY DIFFRACTION2.611enzyme,polymerase,transferase
33
3PML|1|E+3PML|1|F+3PML|1|G
crystal structure of a polymerase lambda variant with a dGTP analog opposite a templating TX-RAY DIFFRACTION2.611enzyme,polymerase,transferase
34
3MGH|1|T+3MGH|1|P+3MGH|1|D
Binary complex of a DNA polymerase lambda loop mutantX-RAY DIFFRACTION2.411enzyme,polymerase,transferase
35
3MGH|1|E+3MGH|1|F+3MGH|1|G
Binary complex of a DNA polymerase lambda loop mutantX-RAY DIFFRACTION2.411enzyme,polymerase,transferase
36
1RZT|1|J+1RZT|1|K+1RZT|1|L
Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA moleculeX-RAY DIFFRACTION2.111enzyme,polymerase,transferase
37
1RZT|1|N+1RZT|1|O+1RZT|1|P
Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA moleculeX-RAY DIFFRACTION2.111enzyme,polymerase,transferase
38
1RZT|1|B+1RZT|1|C+1RZT|1|D
Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA moleculeX-RAY DIFFRACTION2.111enzyme,polymerase,transferase
39
1RZT|1|F+1RZT|1|G+1RZT|1|H
Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA moleculeX-RAY DIFFRACTION2.111enzyme,polymerase,transferase
40
1XSL|1|B+1XSL|1|C+1XSL|1|D
Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gapX-RAY DIFFRACTION2.311enzyme,polymerase,transferase
41
1XSL|1|N+1XSL|1|O+1XSL|1|P
Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gapX-RAY DIFFRACTION2.311enzyme,polymerase,transferase
42
1XSL|1|J+1XSL|1|K+1XSL|1|L
Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gapX-RAY DIFFRACTION2.311enzyme,polymerase,transferase
43
1XSL|1|F+1XSL|1|G+1XSL|1|H
Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gapX-RAY DIFFRACTION2.311enzyme,polymerase,transferase
44
3Q8R|1|T
Human DNA polymerase iota incorporating dGTP opposite 8-oxo-guanineX-RAY DIFFRACTION2.4512double helix,structureenzyme,polymerase,transferase
45
3Q8Q|1|T
Human DNA polymerase iota incorporating dATP opposite 8-oxo-guanineX-RAY DIFFRACTION2.03123double helix,structureenzyme,polymerase,transferase
46
3Q8P|1|T
Human DNA polymerase iota incorporating dCTP opposite 8-oxo-guanineX-RAY DIFFRACTION1.9529enzyme,polymerase,transferase
47
3Q8S|1|T
Human DNA polymerase iota incorporating dTTP opposite 8-oxo-guanineX-RAY DIFFRACTION2.0922enzyme,polymerase,transferase
48
3G6X|1|T+3G6X|1|P
Ternary complex of DNA Polymerase iota:DNA:dGTP with an abasic site at the templating positionX-RAY DIFFRACTION2.0811B-form double helix,double helix,structureenzyme,polymerase,transferase
49
3G6Y|1|T+3G6Y|1|P
Ternary complex of DNA Polymerase iota:DNA:dTTP with an abasic site at the templating positionX-RAY DIFFRACTION2.111B-form double helix,double helix,structureenzyme,polymerase,transferase
50
2FLN|1|T+2FLN|1|P
binary complex of catalytic core of human DNA polymerase iota with DNA (template A)X-RAY DIFFRACTION2.511double helix,structureenzyme,polymerase,transferase
51
2ZKF|1|C+2ZKF|1|D
Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNAX-RAY DIFFRACTION2.5511B-form double helix,double helix,structureenzyme,ligase
52
1HUZ|1|T+1HUZ|1|P
CRYSTAL STRUCTURE OF DNA POLYMERASE COMPLEXED WITH DNA AND CR-PCPX-RAY DIFFRACTION2.611B-form double helix,double helix,structureenzyme,polymerase,transferase
53
1HUZ|1|C+1HUZ|1|D
CRYSTAL STRUCTURE OF DNA POLYMERASE COMPLEXED WITH DNA AND CR-PCPX-RAY DIFFRACTION2.611B-form double helix,double helix,structureenzyme,polymerase,transferase
54
1HUO|1|C+1HUO|1|D
CRYSTAL STRUCTURE OF DNA POLYMERASE BETA COMPLEXED WITH DNA AND CR-TMPPCPX-RAY DIFFRACTION2.611double helix,structureenzyme,polymerase,transferase
55
1HUO|1|T+1HUO|1|P
CRYSTAL STRUCTURE OF DNA POLYMERASE BETA COMPLEXED WITH DNA AND CR-TMPPCPX-RAY DIFFRACTION2.611double helix,structureenzyme,polymerase,transferase
56
3MR3|1|T+3MR3|1|P
Human DNA polymerase eta - DNA ternary complex with the 3'T of a CPD in the active site (TT1)X-RAY DIFFRACTION1.7511B-form double helix,double helix,structureenzyme,polymerase,transferase
57
2XGP|1|T+2XGP|1|P
Yeast DNA polymerase eta in complex with C8-2-acetylaminofluorene containing DNAX-RAY DIFFRACTION2.711B-form double helix,double helix,structureenzyme,polymerase,transferase
58
2XGQ|1|T+2XGQ|1|P
Structure of yeast DNA polymerase eta in complex with C8-N-acetyl-2- aminoanthracene containing DNAX-RAY DIFFRACTION2.711B-form double helix,double helix,structureenzyme,polymerase,transferase
59
2XGP|1|U+2XGP|1|Q
Yeast DNA polymerase eta in complex with C8-2-acetylaminofluorene containing DNAX-RAY DIFFRACTION2.711B-form double helix,double helix,structureenzyme,polymerase,transferase
60
2XGQ|1|U+2XGQ|1|Q
Structure of yeast DNA polymerase eta in complex with C8-N-acetyl-2- aminoanthracene containing DNAX-RAY DIFFRACTION2.711B-form double helix,double helix,structureenzyme,polymerase,transferase
61
2R8J|1|U+2R8J|1|Q
Structure of the Eukaryotic DNA Polymerase eta in complex with 1,2-d(GpG)-cisplatin containing DNAX-RAY DIFFRACTION3.111B-form double helix,double helix,structureenzyme,polymerase,transferase
62
2R8J|1|T+2R8J|1|P
Structure of the Eukaryotic DNA Polymerase eta in complex with 1,2-d(GpG)-cisplatin containing DNAX-RAY DIFFRACTION3.111B-form double helix,double helix,structureenzyme,polymerase,transferase
63
1E3O|1|A+1E3O|1|B
Crystal structure of Oct-1 POU dimer bound to MOREX-RAY DIFFRACTION1.911DNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription
64
2XSD|1|A+2XSD|1|B
Crystal Structure of the dimeric Oct-6 (Pou3f1) POU domain bound to palindromic MORE DNAX-RAY DIFFRACTION2.04911B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription
65
2V2T|1|C+2V2T|1|D
X-ray structure of a NF-kB p50-RelB-DNA complexX-RAY DIFFRACTION3.0511B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
66
3DO7|1|C+3DO7|1|D
X-ray structure of a NF-kB p52/RelB/DNA complexX-RAY DIFFRACTION3.0511B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
67
2P0J|1|C+2P0J|1|D
Structure of restriction endonuclease BstYI bound to non-cognate DNAX-RAY DIFFRACTION2.111B-form double helix,double helix,structureenzyme,hydrolase,nuclease
68
3NM9|1|H+3NM9|1|I
HMGD(M13A)-DNA complexX-RAY DIFFRACTION2.8511DNA-binding transcription factor (TF),HMG box,chromatin,other α-helix,regulatory,structural,transcription
69
1KU7|1|B+1KU7|1|C
Crystal Structure of Thermus aquatics RNA Polymerase SigmaA Subunit Region 4 Bound to-35 Element DNAX-RAY DIFFRACTION2.411B-form double helix,double helix,structureregulatory,transcription
70
2C9N|1|A+2C9N|1|B
Structure of the Epstein-Barr virus ZEBRA protein at approximately 3. 5 Angstrom resolutionX-RAY DIFFRACTION3.311B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,leucine zipper (bZIP),regulatory,transcription
71
2H8C|1|W+2H8C|1|X
Structure of RusA D70N in complex with DNAX-RAY DIFFRACTION3.111B-form double helix,double helix,structureenzyme,hydrolase,nuclease
72
2H8C|1|Y+2H8C|1|Z
Structure of RusA D70N in complex with DNAX-RAY DIFFRACTION3.111B-form double helix,double helix,structureenzyme,hydrolase,nuclease
73
2DPU|1|E+2DPU|1|D
Crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNAX-RAY DIFFRACTION3.111double helix,structureDNA replication/repair,regulatory
74
1BC7|1|A+1BC7|1|B
SERUM RESPONSE FACTOR ACCESSORY PROTEIN 1A (SAP-1)/DNA COMPLEXX-RAY DIFFRACTION2.0111B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
75
1ZAA|1|A+1ZAA|1|B
ZINC FINGER-DNA RECOGNITION: CRYSTAL STRUCTURE OF A ZIF268-DNA COMPLEX AT 2.1 ANGSTROMSX-RAY DIFFRACTION2.111B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
76
1JK1|1|B+1JK1|1|C
Zif268 D20A Mutant Bound to WT DNA SiteX-RAY DIFFRACTION1.911B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
77
1A1H|1|B+1A1H|1|C
QGSR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)X-RAY DIFFRACTION1.611double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
78
1JK2|1|B+1JK2|1|C
Zif268 D20A mutant bound to the GCT DNA siteX-RAY DIFFRACTION1.6511B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
79
1A1F|1|B+1A1F|1|C
DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)X-RAY DIFFRACTION2.111double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
80
1A1K|1|B+1A1K|1|C
RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)X-RAY DIFFRACTION1.911B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
81
1A1G|1|B+1A1G|1|C
DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)X-RAY DIFFRACTION1.911B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
82
1A1L|1|B+1A1L|1|C
ZIF268 ZINC FINGER-DNA COMPLEX (GCAC SITE)X-RAY DIFFRACTION2.311B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
83
1A1J|1|B+1A1J|1|C
RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)X-RAY DIFFRACTION211B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
84
1A1I|1|B+1A1I|1|C
RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)X-RAY DIFFRACTION1.611B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
85
1AAY|1|B+1AAY|1|C
ZIF268 ZINC FINGER-DNA COMPLEXX-RAY DIFFRACTION1.611B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc finger C2H2,Zinc-coordinating,regulatory,transcription
86
1SSP|1|B+1SSP|1|A
WILD-TYPE URACIL-DNA GLYCOSYLASE BOUND TO URACIL-CONTAINING DNAX-RAY DIFFRACTION1.911B-form double helix,double helix,structureenzyme,hydrolase
87
2SSP|1|B+2SSP|1|A
LEUCINE-272-ALANINE URACIL-DNA GLYCOSYLASE BOUND TO ABASIC SITE-CONTAINING DNAX-RAY DIFFRACTION2.2511B-form double helix,double helix,structureenzyme,hydrolase
88
2FLL|1|T+2FLL|1|P
Ternary complex of human DNA polymerase iota with DNA and dTTPX-RAY DIFFRACTION2.611enzyme,polymerase,transferase
89
1BSS|1|C+1BSS|1|D
ECORV-T93A/DNA/CA2+X-RAY DIFFRACTION2.1511B-form double helix,double helix,structureenzyme,hydrolase,nuclease
90
1RV5|1|C+1RV5|1|D
COMPLEX OF ECORV ENDONUCLEASE WITH D(AAAGAT)/D(ATCTT)X-RAY DIFFRACTION2.111B-form double helix,double helix,structureenzyme,hydrolase,nuclease
91
1BSU|1|D+1BSU|1|C
STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASEX-RAY DIFFRACTION211B-form double helix,double helix,structureenzyme,hydrolase,nuclease
92
1AZ0|1|C+1AZ0|1|D
ECORV ENDONUCLEASE/DNA COMPLEXX-RAY DIFFRACTION211B-form double helix,double helix,structureenzyme,hydrolase,nuclease
93
1RVB|1|C+1RVB|1|D
MG2+ BINDING TO THE ACTIVE SITE OF ECO RV ENDONUCLEASE: A CRYSTALLOGRAPHIC STUDY OF COMPLEXES WITH SUBSTRATE AND PRODUCT DNA AT 2 ANGSTROMS RESOLUTIONX-RAY DIFFRACTION2.111B-form double helix,double helix,structureenzyme,hydrolase,nuclease
94
1RVA|1|C+1RVA|1|D
MG2+ BINDING TO THE ACTIVE SITE OF ECO RV ENDONUCLEASE: A CRYSTALLOGRAPHIC STUDY OF COMPLEXES WITH SUBSTRATE AND PRODUCT DNA AT 2 ANGSTROMS RESOLUTIONX-RAY DIFFRACTION211B-form double helix,double helix,structureenzyme,hydrolase,nuclease
95
1BUA|1|C+1BUA|1|D
STRUCTURAL AND ENERGETIC ORIGINS OF INDIRECT READOUT IN SITE-SPECIFIC DNA CLEAVAGE BY A RESTRICTION ENDONUCLEASEX-RAY DIFFRACTION2.1511B-form double helix,double helix,structureenzyme,hydrolase,nuclease
96
2B0E|1|C+2B0E|1|D
EcoRV Restriction Endonuclease/GAAUTC/Ca2+X-RAY DIFFRACTION1.911B-form double helix,double helix,structureenzyme,hydrolase,nuclease
97
2B0D|1|C+2B0D|1|D
EcoRV Restriction Endonuclease/GAATTC/Ca2+X-RAY DIFFRACTION211B-form double helix,double helix,structureenzyme,hydrolase,nuclease
98
1SUZ|1|C+1SUZ|1|D
The structure of K92A EcoRV bound to cognate DNA and Mg2+X-RAY DIFFRACTION1.811B-form double helix,double helix,structureenzyme,hydrolase,nuclease
99
1SX8|1|C+1SX8|1|D
EcoRV bound to cognate DNA and Mn2+X-RAY DIFFRACTION2.1511B-form double helix,double helix,structureenzyme,hydrolase,nuclease
100
1B97|1|C+1B97|1|D
ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUPX-RAY DIFFRACTION1.911B-form double helix,double helix,structureenzyme,hydrolase,nuclease
101
1B94|1|C+1B94|1|D
RESTRICTION ENDONUCLEASE ECORV WITH CALCIUMX-RAY DIFFRACTION1.911B-form double helix,double helix,structureenzyme,hydrolase,nuclease
102
1B95|1|C+1B95|1|D
ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUPX-RAY DIFFRACTION2.0511B-form double helix,double helix,structureenzyme,hydrolase,nuclease
103
1B96|1|C+1B96|1|D
ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUPX-RAY DIFFRACTION2.311B-form double helix,double helix,structureenzyme,hydrolase,nuclease
104
1EON|1|C+1EON|1|D
ECORV BOUND TO 3'-S-PHOSPHOROTHIOLATE DNA AND CA2+X-RAY DIFFRACTION1.611B-form double helix,double helix,structureenzyme,hydrolase,nuclease
105
1EO3|1|C+1EO3|1|D
INHIBITION OF ECORV ENDONUCLEASE BY DEOXYRIBO-3'-S-PHOSPHOROTHIOLATES: A HIGH RESOLUTION X-RAY CRYSTALLOGRAPHIC STUDYX-RAY DIFFRACTION211B-form double helix,double helix,structureenzyme,hydrolase,nuclease
106
2GE5|1|C+2GE5|1|D
EcoRV Restriction Endonuclease C-terminal deletion mutant/GATATC/Ca2+X-RAY DIFFRACTION2.411B-form double helix,double helix,structureenzyme,hydrolase,nuclease
107
1BGB|1|C+1BGB|1|D
ECORV ENDONUCLEASE COMPLEX WITH 5'-CGGGATATCCC DNAX-RAY DIFFRACTION211B-form double helix,double helix,structureenzyme,hydrolase,nuclease
108
3BM3|1|C+3BM3|1|D
Restriction endonuclease PspGI-substrate DNA complexX-RAY DIFFRACTION1.711B-form double helix,double helix,structureenzyme,hydrolase,nuclease
109
2Z3X|1|D+2Z3X|1|E
Structure of a Protein-DNA Complex Essential for DNA Protection in Spore of Bacillus SpeciesX-RAY DIFFRACTION2.111A-form double helix,double helix,structurechromatin,structural
110
2XO7|1|C+2XO7|1|B
Crystal structure of a dA:O-allylhydroxylamine-dC basepair in complex with fragment DNA polymerase I from Bacillus stearothermophilusX-RAY DIFFRACTION2.8511B-form double helix,double helix,structureenzyme,polymerase,transferase
111
1HLO|1|C+1HLO|1|D
THE CRYSTAL STRUCTURE OF AN INTACT HUMAN MAX-DNA COMPLEX: NEW INSIGHTS INTO MECHANISMS OF TRANSCRIPTIONAL CONTROLX-RAY DIFFRACTION2.811B-form double helix,double helix,structureDNA-binding transcription factor (TF),basic transcription factor,helix-loop-helix (bHLH),regulatory,transcription
112
2X6V|1|C+2X6V|1|D
Crystal structure of human TBX5 in the DNA-bound and DNA-free formX-RAY DIFFRACTION2.211B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
113
3Q8K|1|E
Crystal Structure of Human Flap Endonuclease FEN1 (WT) in complex with product 5'-flap DNA, SM3+, and K+X-RAY DIFFRACTION2.200153enzyme,hydrolase,nuclease
114
3NM9|1|E+3NM9|1|F
HMGD(M13A)-DNA complexX-RAY DIFFRACTION2.8511DNA-binding transcription factor (TF),HMG box,chromatin,other α-helix,regulatory,structural,transcription
115
3GXQ|1|D+3GXQ|1|C
Structure of ArtA and DNA complexX-RAY DIFFRACTION2.3511B-form double helix,double helix,structureDNA-binding transcription factor (TF),MetR homology,other α-helix,regulatory,transcription
116
2FLP|1|T+2FLP|1|P
Binary complex of the catalytic core of human DNA polymerase iota with DNA (template G)X-RAY DIFFRACTION2.411double helix,structureenzyme,polymerase,transferase
117
3NM9|1|K+3NM9|1|L
HMGD(M13A)-DNA complexX-RAY DIFFRACTION2.8511DNA-binding transcription factor (TF),HMG box,chromatin,other α-helix,regulatory,structural,transcription
118
3DO7|1|E
X-ray structure of a NF-kB p52/RelB/DNA complexX-RAY DIFFRACTION3.0511B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
119
3NM9|1|B+3NM9|1|C
HMGD(M13A)-DNA complexX-RAY DIFFRACTION2.8511DNA-binding transcription factor (TF),HMG box,chromatin,other α-helix,regulatory,structural,transcription
120
3NM9|1|N+3NM9|1|O
HMGD(M13A)-DNA complexX-RAY DIFFRACTION2.8511DNA-binding transcription factor (TF),HMG box,chromatin,other α-helix,regulatory,structural,transcription
121
3L1Q|1|A+3L1Q|1|B
The crystal structure of the undecamer d(TGGCCTTAAGG)X-RAY DIFFRACTION2.511NAKB_NA_annotationNAKB_protein_annotation
122
476D|1|A+476D|1|B
CALCIUM FORM OF B-DNA UNDECAMER GCGAATTCGCGX-RAY DIFFRACTION1.311B-form double helix,double helix,structure
123
3KET|1|B+3KET|1|C
Crystal structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae bound to a palindromic operatorX-RAY DIFFRACTION2.411B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
124
1A3Q|1|C+1A3Q|1|D
HUMAN NF-KAPPA-B P52 BOUND TO DNAX-RAY DIFFRACTION2.111B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
125
3OH9|1|B+3OH9|1|C
AlkA Undamaged DNA Complex: Interrogation of a T:A base pairX-RAY DIFFRACTION2.80211B-form double helix,double helix,structureenzyme,hydrolase
126
3MQY|1|D+3MQY|1|F+3MQY|1|C+3MQY|1|E
SgrAI with cleaved DNA and Magnesium boundX-RAY DIFFRACTION211B-form double helix,double helix,structureenzyme,hydrolase,nuclease
127
1NFK|1|C+1NFK|1|D
STRUCTURE OF THE NUCLEAR FACTOR KAPPA-B (NF-KB) P50 HOMODIMERX-RAY DIFFRACTION2.311B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
128
2OAA|1|C+2OAA|1|D+2OAA|1|E+2OAA|1|F
Restriction endonuclease MvaI-cognate DNA substrate complexX-RAY DIFFRACTION1.511double helix,structureenzyme,hydrolase,nuclease
129
2Q10|1|C+2Q10|1|D+2Q10|1|E+2Q10|1|F
RESTRICTION ENDONUCLEASE BcnI (WILD TYPE)-COGNATE DNA SUBSTRATE COMPLEXX-RAY DIFFRACTION1.7511enzyme,hydrolase,nuclease
130
2ODI|1|C+2ODI|1|D+2ODI|1|E+2ODI|1|F
Restriction Endonuclease BCNI-Cognate DNA Substrate ComplexX-RAY DIFFRACTION1.4511enzyme,hydrolase,nuclease
131
1RRQ|1|B+1RRQ|1|C
MutY adenine glycosylase in complex with DNA containing an A:oxoG pairX-RAY DIFFRACTION2.2211B-form double helix,double helix,structureenzyme,hydrolase
132
3G0Q|1|B+3G0Q|1|C
Crystal Structure of MutY bound to its inhibitor DNAX-RAY DIFFRACTION2.211double helix,structureenzyme,hydrolase
133
1ORN|1|B+1ORN|1|C
Structure of a Trapped Endonuclease III-DNA Covalent Intermediate: Estranged-Guanine ComplexX-RAY DIFFRACTION1.711B-form double helix,double helix,structureenzyme,hydrolase,nuclease
134
1ORP|1|B+1ORP|1|C
Structure of a Trapped Endonuclease III-DNA Covalent Intermediate: Estranged-Adenine ComplexX-RAY DIFFRACTION2.211B-form double helix,double helix,structureenzyme,hydrolase,nuclease
135
1VRL|1|B+1VRL|1|C
MutY adenine glycosylase in complex with DNA and soaked adenine free baseX-RAY DIFFRACTION2.511enzyme,hydrolase
136
1RRS|1|B+1RRS|1|C
MutY adenine glycosylase in complex with DNA containing an abasic siteX-RAY DIFFRACTION2.411B-form double helix,double helix,structureenzyme,hydrolase
137
1P59|1|B+1P59|1|C
Structure of a non-covalent Endonuclease III-DNA ComplexX-RAY DIFFRACTION2.511B-form double helix,double helix,structureenzyme,hydrolase,nuclease
138
1TEZ|1|K+1TEZ|1|L
COMPLEX BETWEEN DNA AND THE DNA PHOTOLYASE FROM ANACYSTIS NIDULANSX-RAY DIFFRACTION1.811enzyme,lyase
139
1TEZ|1|I+1TEZ|1|J
COMPLEX BETWEEN DNA AND THE DNA PHOTOLYASE FROM ANACYSTIS NIDULANSX-RAY DIFFRACTION1.811enzyme,lyase
140
2W36|1|C+2W36|1|D
Structures of endonuclease V with DNA reveal initiation of deaminated adenine repairX-RAY DIFFRACTION2.111enzyme,hydrolase,nuclease

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