Equivalence class DNA_4.0_34292.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1KBU|1|C+ 1KBU|1|D (rep) | LOXP | CRE RECOMBINASE BOUND TO A LOXP HOLLIDAY JUNCTION | X-ray diffraction | 2.2 | 2002-06-07 | ||||
| 2 | 1PVP|1|C+ 1PVP|1|D | 34-MER | Escherichia virus P1 | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, ALSHG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 | X-ray diffraction | 2.35 | 2004-02-17 | |||
| 3 | 1PVR|1|C+ 1PVR|1|D | 34-MER | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE LOXP (WILDTYPE) RECOGNITION SITE | X-ray diffraction | 2.65 | 2004-02-17 | ||||
| 4 | 1PVQ|1|C+ 1PVQ|1|D | DNA 34-MER | Escherichia virus P1 | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 | X-ray diffraction | 2.75 | 2004-02-17 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1PVR|1|C+1PVR|1|D | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE LOXP (WILDTYPE) RECOGNITION SITE | X-RAY DIFFRACTION | 2.65 | 34 | enzyme,recombinase | |
| 2 | 1KBU|1|C+1KBU|1|D | CRE RECOMBINASE BOUND TO A LOXP HOLLIDAY JUNCTION | X-RAY DIFFRACTION | 2.2 | 34 | enzyme,recombinase | |
| 3 | 1PVQ|1|C+1PVQ|1|D | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 | X-RAY DIFFRACTION | 2.75 | 34 | enzyme,recombinase | |
| 4 | 1PVP|1|C+1PVP|1|D | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, ALSHG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 | X-RAY DIFFRACTION | 2.35 | 34 | enzyme,recombinase |
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