Equivalence class DNA_4.0_32279.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1GQU|1|A (rep) | DNA (5'(*AP*TP*AP*UP*AP*T)-3') | Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairing | X-ray diffraction | 2.5 | 2002-12-05 | ||||
| 2 | 1GQU|1|B | DNA (5'(*AP*TP*AP*UP*AP*T)-3') | Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairing | X-ray diffraction | 2.5 | 2002-12-05 | ||||
| 3 | 1GQU|1|C | DNA (5'(*AP*TP*AP*UP*AP*T)-3') | Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairing | X-ray diffraction | 2.5 | 2002-12-05 | ||||
| 4 | 1GQU|1|D | DNA (5'(*AP*TP*AP*UP*AP*T)-3') | Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairing | X-ray diffraction | 2.5 | 2002-12-05 | ||||
| 5 | 1RSB|1|A | 5'-D(*AP*TP*AP*TP*AP*T)-3' | X-ray study of the DNA oligomer d(ATATAT) in P65 space group | X-ray diffraction | 2.17 | 2004-05-25 | ||||
| 6 | 1RSB|1|B | 5'-D(*AP*TP*AP*TP*AP*T)-3' | X-ray study of the DNA oligomer d(ATATAT) in P65 space group | X-ray diffraction | 2.17 | 2004-05-25 | ||||
| 7 | 1RSB|1|C | 5'-D(*AP*TP*AP*TP*AP*T)-3' | X-ray study of the DNA oligomer d(ATATAT) in P65 space group | X-ray diffraction | 2.17 | 2004-05-25 | ||||
| 8 | 1RSB|1|D | 5'-D(*AP*TP*AP*TP*AP*T)-3' | X-ray study of the DNA oligomer d(ATATAT) in P65 space group | X-ray diffraction | 2.17 | 2004-05-25 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length | NAKB_NA_annotation | NAKB_protein_annotation |
|---|---|---|---|---|---|---|---|
| 1 | 1RSB|1|A | X-ray study of the DNA oligomer d(ATATAT) in P65 space group | X-RAY DIFFRACTION | 2.17 | 6 | parallel helix,structure | |
| 2 | 1RSB|1|B | X-ray study of the DNA oligomer d(ATATAT) in P65 space group | X-RAY DIFFRACTION | 2.17 | 6 | parallel helix,structure | |
| 3 | 1GQU|1|A | Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairing | X-RAY DIFFRACTION | 2.5 | 6 | parallel helix,structure | |
| 4 | 1GQU|1|B | Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairing | X-RAY DIFFRACTION | 2.5 | 6 | parallel helix,structure | |
| 5 | 1GQU|1|C | Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairing | X-RAY DIFFRACTION | 2.5 | 6 | parallel helix,structure | |
| 6 | 1RSB|1|D | X-ray study of the DNA oligomer d(ATATAT) in P65 space group | X-RAY DIFFRACTION | 2.17 | 6 | parallel helix,structure | |
| 7 | 1GQU|1|D | Crystal structure of an alternating A-T oligonucleotide fragment with Hoogsteen base pairing | X-RAY DIFFRACTION | 2.5 | 6 | parallel helix,structure | |
| 8 | 1RSB|1|C | X-ray study of the DNA oligomer d(ATATAT) in P65 space group | X-RAY DIFFRACTION | 2.17 | 6 | parallel helix,structure |
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